|
Name : Bache_2159 (Bache_2159) Accession : YP_004161714.1 Strain : Bacteroides helcogenes P 36-108 Genome accession: NC_014933 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2637585 - 2638865 bp Length : 1281 bp Strand : + Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: pdi:BDI_2219 UDP-glucose-6 dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisat DNA sequence : ATGGACTCAATAAAAATTTGCGTAATCGGTCTCGGTTATGTAGGGCTACCTTTGGCCCGTCTTTTTTCCACTAAGTATCA AACCATTGGTTTTGATATGGACCAAAAGCGTGTGGATTACTTAATGTCTGGCCATGATTCTACATTTGAAGTGTCTGATG AATTGTTACAAGATGCCATTTACAATCACGGGTTTATATGTACTACAAATATGGATAAAATTCGTGACTGCAATTTTTAT GTGGTTGCAGTTCCTACTCCTGTGGATGACAATAATCGTCCAGATCTTCGTCCTTTATGGGGAGCCAGCGAGACGGTGGG TAAAGTTATCAAGAAAGGTGACATTGTGGTTTATGAATCTACTGTTTATCCTGGGGTCACTGAGGAGGAATGCTTGCCTG TGGTGGAACGTGTATCAGGTTTGAAGTTTAATGAAGACTTCTTTGCCGGTTATTCTCCCGAACGTATCAATCCCGGAGAT AAATTTCATACGGTAGAGAAGATAAAAAAAGTAACATCAGGTTCTACTCCGGAGATTGCAGATGTTGTGGATGCGGTTTA TAATTCGGTATTGGTGAATGGCACTCATAAAGCGCCAAATATCAAGGTGGCGGAAGCATCGAAGATCATAGAGAATTCTC AGCGTGATGTGAATATCGCTTTTATGAATGAATTGGCGAAGATATTCAATGCAATGGGTATTGATACTAATGATGTGATA GAGGCTGCTGCCTCTAAATGGAACTTTATCAAGTTGAAACCGGGCTTGGTTGGTGGACATTGTATAAGTGTGGATCCTTA TTATTTGATTCAGAAAGCACAAGTGTATGGCGTGCTGCCCCGTGTGATGTTTTCTGCACGTCGCTTGAATGACGGTATGG GTGATTATGTAGGCAATCAAGCGATAAAGTTGATGAACAAGAAAGGGGTGTTGGTTAAGGATAGTAAAATTTTGATTTTA GGTTTCACATTTAAGGAAAATTGTCCGGATGTGCGTAACACCAAGGTTATTGATATATACCACACATTAGAGGAATATAC AAAAAACATCACCGTATATGATCCTTGGGCAGATGCTGATAGGGTTAAATATGAGTATGGTGTGAATTTGTCTGCCAATT CGTTCGATTCATTGAAGGGAAAATTTGATGCCGTGGTATTGGCTGTAGCTCATAAAGAATTTGTGTCCATTGATATACGC TCATTTCTGAAGGATAAAAATGGGGTAGTATATGATGTAAAGGGTGTTTTAAATAGAGAAGTAGTTGATGGAAGATTATA A Protein sequence : MDSIKICVIGLGYVGLPLARLFSTKYQTIGFDMDQKRVDYLMSGHDSTFEVSDELLQDAIYNHGFICTTNMDKIRDCNFY VVAVPTPVDDNNRPDLRPLWGASETVGKVIKKGDIVVYESTVYPGVTEEECLPVVERVSGLKFNEDFFAGYSPERINPGD KFHTVEKIKKVTSGSTPEIADVVDAVYNSVLVNGTHKAPNIKVAEASKIIENSQRDVNIAFMNELAKIFNAMGIDTNDVI EAAASKWNFIKLKPGLVGGHCISVDPYYLIQKAQVYGVLPRVMFSARRLNDGMGDYVGNQAIKLMNKKGVLVKDSKILIL GFTFKENCPDVRNTKVIDIYHTLEEYTKNITVYDPWADADRVKYEYGVNLSANSFDSLKGKFDAVVLAVAHKEFVSIDIR SFLKDKNGVVYDVKGVLNREVVDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 9e-103 | 55 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 9e-103 | 55 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-92 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bache_2159 | YP_004161714.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 4e-103 | 55 |
