Gene Information

Name : Bache_2079 (Bache_2079)
Accession : YP_004161636.1
Strain : Bacteroides helcogenes P 36-108
Genome accession: NC_014933
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2543368 - 2544033 bp
Length : 666 bp
Strand : +
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: bvu:BVU_2346 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: uncharacterized prote

DNA sequence : 
ATGATTAAGTTAACAGGCATCAACAAAATTTATCGTACCAATGAGATTGAAACCATGGCATTGGAGAATGTAAACCTCGA
AGTGAATAAGGGAGAGTTCCTCAGTATCATGGGACCTTCAGGTTGTGGCAAGTCCACATTGCTTAATATTATGGGTTTGC
TGGATGCACCTACCAGTGGTACGATTGAAATAGCCGGAATCAAGGTGGAAGGGATGAAAGATAAGGAATTGGCCGCTTTC
CGTAATCGGAAGTTAGGTTTTGTATTTCAGTCTTTCCACTTGATTAACTCACTGAATGTACTGGATAATGTGGAACTGCC
CCTGCTGTACCGGAAAGTATCGGCCAAGGAGCGCCGTCGTCTGGCCGAAGAGGTATTACAAAAAGTAGGGCTGAGTCATC
GTATGCGTCACATGCCTACACAGCTTTCCGGTGGTCAGTGCCAGCGTGTAGCCATCGCTCGTGCCATCATCGGCAATCCG
GAGATAATACTCGCCGATGAACCTACCGGTAATTTGGATTCCAAGATGGGTGCGGAAGTCATGGATCTGTTGCATCAACT
CAATAAAGAAGACGGACGTACCATTGTGATGGTAACTCATAATGAAGAACAAGCTAAACTGACTTCAAGGACTGTCCGCT
TTTTCGACGGACGTCAGGTAGAGTAA

Protein sequence : 
MIKLTGINKIYRTNEIETMALENVNLEVNKGEFLSIMGPSGCGKSTLLNIMGLLDAPTSGTIEIAGIKVEGMKDKELAAF
RNRKLGFVFQSFHLINSLNVLDNVELPLLYRKVSAKERRRLAEEVLQKVGLSHRMRHMPTQLSGGQCQRVAIARAIIGNP
EIILADEPTGNLDSKMGAEVMDLLHQLNKEDGRTIVMVTHNEEQAKLTSRTVRFFDGRQVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-36 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bache_2079 YP_004161636.1 ABC transporter related protein NC_012469.1.7686878. Protein 3e-56 57
Bache_2079 YP_004161636.1 ABC transporter related protein CP001581.1.gene598.p Protein 7e-43 46
Bache_2079 YP_004161636.1 ABC transporter related protein CP001581.1.gene798.p Protein 2e-41 46
Bache_2079 YP_004161636.1 ABC transporter related protein NC_008702.1.4606598. Protein 3e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bache_2079 YP_004161636.1 ABC transporter related protein VFG0869 Protein 4e-23 45