|
Name : Bache_1465 (Bache_1465) Accession : YP_004161056.1 Strain : Bacteroides helcogenes P 36-108 Genome accession: NC_014933 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1842147 - 1843421 bp Length : 1275 bp Strand : - Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR002317: IPR006195: IPR018156: IPR015866: IPR 002314; KEGG: bfs:BF0928 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; S DNA sequence : ATGCTTACCATCAAACAAATTACAGAAAACACCGACGCGGTAATCCGCGGATTGGAGAAGAAGCATTTCAAAAATGCTAA AGAAACCATTGAGCAAGTGCTCGAATTAAACAATAAACGACGTAATACCCAAACCTCTTTAGATAAGAATCTGTCAGAAG TCAATTCATTGTCCAAATCCATCGGCCAGTTGATGAAAGAAGGCAAAAAAGAGGATGCGGAAGGTGCAAAAAGCCGTGTA GCAGAGCTGAAAGAAGCCAACAAGAATTTGCAAGCAGACATGGATCAAGCCGCTACCGATTTGCAAAACGTGCTCTATAC CATCCCCAATATTCCTTATGATGAAGTTCCCGAAGGCGCAAGCGCCGAAGATAATGTCGTAGTGAAAATGGGAGGTATGG AAAATGAACTTCCCAAAGACGCCCTTCCTCATTGGGAACTGACAAAAAAGTATGATATAATAGATTTTGATCTTGGTGTA AAAATCACTGGTGCTGGATTTCCGGTATATAAAGGAAAAGGCGCCCGCTTGCAACGGGCACTCATCAACTTCTTCTTGGA CGAAGCACGTACTTCCGGATACACGGAAATTATGCCCCCAACAGTGGTAAACGCGGCTTCCGGATACGGAACCGGCCAAC TTCCCGACAAAGAAGGACAAATGTACCACTGCGAAGTGGATGACCTATATTTGATTCCTACAGCTGAAGTTCCCGTTACA AACATATACCGCGACGTCATTTTAGACGAGAAGCAATTACCTATCAAGAATTGCGCTTACACTGAATGTTTCCGCCGAGA AGCAGGTTCCTACGGAAAAGATGTACGTGGATTGAATCGTTTGCATGAATTTTCCAAAGTAGAATTGGTCCGTATCGACA AACCTGAGCATAGCAAACAGTCTCATCAGGAAATGCTGGATCACGTAGAAGGATTACTTAAAAAACTGGAACTACCATAC CGTATTCTTCGTCTTTGTGGCGGTGACATGAGTTTCACTTCTTCCATTTGCTACGATTTCGAAGTTTACAGTGAAGCTCA AAAGCGCTGGTTGGAAGTAAGTTCTGTTTCCAATTTTGACACATATCAGGCTAACCGTCTGAAATGCCGTTACCGCACAG CAGAAAAGAAGACAGAACTTTGTCACACATTGAACGGTTCCGCATTGGCACTGCCACGCATCGTTGCCGCATTATTGGAA AACAACCAAACTCCAGAGGGTATCCGAATACCCAAGGCATTGGTTCCATATTGCGGATTTGAAATGATTGACTGA Protein sequence : MLTIKQITENTDAVIRGLEKKHFKNAKETIEQVLELNNKRRNTQTSLDKNLSEVNSLSKSIGQLMKEGKKEDAEGAKSRV AELKEANKNLQADMDQAATDLQNVLYTIPNIPYDEVPEGASAEDNVVVKMGGMENELPKDALPHWELTKKYDIIDFDLGV KITGAGFPVYKGKGARLQRALINFFLDEARTSGYTEIMPPTVVNAASGYGTGQLPDKEGQMYHCEVDDLYLIPTAEVPVT NIYRDVILDEKQLPIKNCAYTECFRREAGSYGKDVRGLNRLHEFSKVELVRIDKPEHSKQSHQEMLDHVEGLLKKLELPY RILRLCGGDMSFTSSICYDFEVYSEAQKRWLEVSSVSNFDTYQANRLKCRYRTAEKKTELCHTLNGSALALPRIVAALLE NNQTPEGIRIPKALVPYCGFEMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-67 | 44 |
