Gene Information

Name : sitD (BARCL_0097)
Accession : YP_004158374.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : Iron transport protein, inner membrane component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 105973 - 106878 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCATCAATTGCTGCTTCCTTTTCAGTTTTCTTTTATGATTAAAGGTATGATCATTACCATTGTTCTGGCTGTTCC
AATGGCTATGCTTTCTTGTTTTCTTATTTTAAAAGGATGGGCCCTTTTAGGAGATGCAATTTCTCACGCGGTTTTTCCTG
GGGTAGTTATTGGTTATATGGCGACCCCATGGGCGATGACATTTTTATCTTCTATACCGTTTCTTTGGTTTCATGATGTG
CGTGCTGCTAATGTTACAATGACTTTGATTGCTTGTGGTGCTTTTTTAGCAGGTATGATTTGTGCCATTGCAACCGGTTT
CTTAGGGAATAACAGTCGTATTAAACAGGATACGATTATGGGTGTTGTTTTTTCGTCCATGTTTGGTTTGGGACTTGTTT
TGGCAACAGCAATATATAGTGATTTGGATTTAAATCACATTTTATTCGGTAATCTTTTAGGTGTTAATTGGCTTGATATT
ACGCAAACAGCAATAATTGCTATGATTGTTGTAATGGTTTTGAGTATAAAATGGCGTGATTTTATGTTGTACATTTTTGA
TTCGATTCAAGCACGTGCAATAGGATTACAAATATCAGTGCTTCATTATATTCTTTTAACAATGATTTCTCTCACAATTG
TTGCTGCTCTGCAGGCAGTTGGAATTATTTTAGTTATTTCTTTGTTAATCGCACCGGGCGCTATTGCTTATCTTATCACT
AAGCGTTTTTTTTCTATGCTATTGATTGCTGTATTTATTGCAGTGTGTTCGAGTTTTCTAGGAATTTATCTCAGCTTATT
TATTGGTTCTGATTCTGCTGCCACAATTGTATTGATTTTAACACTCATTTTTATTGCTGTTTTTATATCAAATTTTTTTG
TTCAGAGTACAGTTGAAGAAATTTAA

Protein sequence : 
MIHQLLLPFQFSFMIKGMIITIVLAVPMAMLSCFLILKGWALLGDAISHAVFPGVVIGYMATPWAMTFLSSIPFLWFHDV
RAANVTMTLIACGAFLAGMICAIATGFLGNNSRIKQDTIMGVVFSSMFGLGLVLATAIYSDLDLNHILFGNLLGVNWLDI
TQTAIIAMIVVMVLSIKWRDFMLYIFDSIQARAIGLQISVLHYILLTMISLTIVAALQAVGIILVISLLIAPGAIAYLIT
KRFFSMLLIAVFIAVCSSFLGIYLSLFIGSDSAATIVLILTLIFIAVFISNFFVQSTVEEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-64 53
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-64 53
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-64 53
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-64 52
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-64 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_004158374.1 Iron transport protein, inner membrane component BAC0352 Protein 2e-64 52
sitD YP_004158374.1 Iron transport protein, inner membrane component BAC0442 Protein 1e-54 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitD YP_004158374.1 Iron transport protein, inner membrane component VFG0528 Protein 2e-64 52