Gene Information

Name : sitB (BARCL_0095)
Accession : YP_004158372.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 104286 - 105116 bp
Length : 831 bp
Strand : +
Note : -

DNA sequence : 
ATGACTGAGTCGGGAATATCTGCCCAAGATGTATCTGTGACTTATCGTAATGGACATACAGCTTTGCGAGAAGTGAGTTT
TGAAAGTCCTATGGGTTCTATTTCCGCATTGATTGGGGTTAATGGATCAGGGAAGTCTACATTATTTAAAGCTATTATGG
GATTTGTAAAACCTTCAAAGGGAAAAATTAGCATTTTAGGTTTATCAGTTAAAAAGGCTTTGAAACAAAACCTTATTGCA
TATGTTCCCCAGAGTGAGGATGTTGATTGGAATTTTCCTGTTCTCGTTGAAGATGTTGTTTTGATGGGAAGGTATGGCCA
TATGAATTTCTTTCGCTATGCCCGAGCACAAGATTATGAAGCTGTTCGTGTTGCTTTAGAACGTGTCGATATGTTGCCAT
TTTCTAAACGTCAGATTGGTGAACTGTCTGGCGGACAAAAAAAACGCGTTTTTTTGGCACGTGCTCTTGCCCAGAAAGCA
AAAGCTATTTTACTAGATGAGCCTTTTACAGGAGTTGATGTCAAAACAGAGGATAAAATTATTGCTTTGTTAAAAGATCT
GCGTAAAGAAGGTGCTATCATATTAGTCTCTACTCACAATTTAGATTCCGTTGCTGAATTTTGTGATCGTACGATTTTAA
TCAAGGGGACGGTTGTAGCTTCTGGGTTAACAGAAGTGGTTTTTACACAAAAAAATCTTGAACAAATTTTTGATGGTGCT
CTACGTCATCATTATGTTGGTTTTCAAAATGCACAAAAAAATAATGTTACCACAAATGATGATAAGTTTTTATTTCATGA
TTGCAATCAAAAACTGGAGCATATTTTATGA

Protein sequence : 
MTESGISAQDVSVTYRNGHTALREVSFESPMGSISALIGVNGSGKSTLFKAIMGFVKPSKGKISILGLSVKKALKQNLIA
YVPQSEDVDWNFPVLVEDVVLMGRYGHMNFFRYARAQDYEAVRVALERVDMLPFSKRQIGELSGGQKKRVFLARALAQKA
KAILLDEPFTGVDVKTEDKIIALLKDLRKEGAIILVSTHNLDSVAEFCDRTILIKGTVVASGLTEVVFTQKNLEQIFDGA
LRHHYVGFQNAQKNNVTTNDDKFLFHDCNQKLEHIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-83 65
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-83 65
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-83 65
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 8e-82 64
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 8e-82 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_004158372.1 iron ABC transporter ATP-binding protein BAC0350 Protein 4e-83 65
sitB YP_004158372.1 iron ABC transporter ATP-binding protein BAC0440 Protein 1e-72 65
sitB YP_004158372.1 iron ABC transporter ATP-binding protein BAC0400 Protein 1e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_004158372.1 iron ABC transporter ATP-binding protein VFG0526 Protein 3e-83 65