Gene Information

Name : sitA (BARCL_0094)
Accession : YP_004158371.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : Iron transport protein, periplasmic-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 103381 - 104289 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGCAACTGAAGGCGTTTTTTATCGCATGTTTTTTGGGTATAATTCTTTTAACTCCCGGTATAGTTTTAAGTGCTGGTAA
ATTTAAAGCTGTTACAACTTTCACTATAATTGCTGATATGGCTCGTAATGTTGCAGGTGATGTTGCCGATGTTGAATCAA
TTACTAAACCAGGTGCTGAAATTCATGAATATCAGCCTACACCACGCGATCTTATGCGTGCTCAAGGAGCTAACCTTATC
TTATGGAATGGTTTGGAATTAGAGCTTTGGTTTGAGAAGTTTTTTCAAAATGTCAAGGATGTTCCAAGTGTAGTCGTTTC
AGAAGGTATTGTGACTATTAAAATTGGAGATGGGCCTTTTAGTGGTAAACCAAATCCCCATGCGTGGATGTCACCAGTCT
CCGCTCTGATTTATGTTGATAATATTCGTGATGCTTTTGTAAAATATGATCCTGAGCATGCTGCTGTTTATAATAAAAAT
GCTGAAGTTTATAAACAAAAGATTCGTTTGAGCATTGATCCAATTAAAGCTGAGTTGCAAACAATACCAGAAGACAGACG
TTGGCTTGTAACAAGTGAAGGTGCATTTAGTTATTTAGCTCGTGATTTCGGTTTGAAAGAACTCTATTTATGGCCCATTA
ATGCTGATCAGCAAGGGACACCGCAGCAGATTAAGAATGTCATTGATGCGGTTCGGAAATATCATATTCCAGTTGTTTTT
TCTGAAAGCACTGTTTCCGCTGCACCTGCTAAGCAGGTGGCAAGAGAAACAGGAGCTAAATATGGGGGGGTACTTTATGT
TGATTCATTGAGTGATAAAGATGGTGAGGTTCCTACTTATATTGATTTATTACGTGTTACGAGTGCCCGTATTACTAAGG
CTTTGTCAGATGAGGTAAAGGGTCGATGA

Protein sequence : 
MQLKAFFIACFLGIILLTPGIVLSAGKFKAVTTFTIIADMARNVAGDVADVESITKPGAEIHEYQPTPRDLMRAQGANLI
LWNGLELELWFEKFFQNVKDVPSVVVSEGIVTIKIGDGPFSGKPNPHAWMSPVSALIYVDNIRDAFVKYDPEHAAVYNKN
AEVYKQKIRLSIDPIKAELQTIPEDRRWLVTSEGAFSYLARDFGLKELYLWPINADQQGTPQQIKNVIDAVRKYHIPVVF
SESTVSAAPAKQVARETGAKYGGVLYVDSLSDKDGEVPTYIDLLRVTSARITKALSDEVKGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-97 65
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-97 65
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-97 65
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-97 65
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-97 65

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_004158371.1 Iron transport protein, periplasmic-binding protein BAC0349 Protein 7e-98 65
sitA YP_004158371.1 Iron transport protein, periplasmic-binding protein BAC0439 Protein 5e-90 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_004158371.1 Iron transport protein, periplasmic-binding protein VFG0525 Protein 6e-98 65