Gene Information

Name : virB10 (BARCL_0627)
Accession : YP_004158890.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB10
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 685906 - 687186 bp
Length : 1281 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 12421311, 15569944; Product type m : membrane component

DNA sequence :
ATGAATGATGAAATGGACGAAATAAGCTTCAATGATCGCGATACAATTAAGGATCGTAATAGGACAGAGGATCGCGATAC
AATAAAAGACAATCAAGGAAAAAAAGAGAGCTTTAATGTAGGAAAAGCCATTGCTCTTCTTATCCTCTTCAGTGTCTGTA
TTTATTTAATGTATGCAATCCTTTCAACTTCAAAAGATACGAAGAAACAACCAATAGAATTGCCTAAAGAAACAACCAAT
AAGCAAACAGAGCTTTTCCAATCCGTCAAGCCGACGTTAGCTCCTCTTGAGTTGGTTGACAAAAATAAAACCCTGTTGCC
TAAAGTTGAACTACCAACGCCAACAATCAATCAACCAGAATCTAATAATAGTGATAATAAGTTGTTGGAAGCAGCACAAC
GAGCTCCCGTCTTGGCCTATTCAAATCCAAATCAGCAACAAGCTAATACAGCCAATAATAATGATAATAATGGTGCTTCT
CCTTCCCAAAACAATAACCCCGATAAAACAGCACAACAGTTCAATCAGCTCCTCAAACCAACAAAGCTAGACGGTATTCG
CGCTTCAACACTCGGTAACCGAAATTACATCATTGCAATGGGAGCTTCTATCCCATGTATCTTAGAAACAGCAGTTAGTA
GTGAACAACAAGGTTTTGTCAGTTGTATCGTTTCCAGAGATATCTTGTCAGACAATGGTCGTGTCGTCTTGCTCGATAAA
GGAACACAAATCGTCGGTGAATATCGTGCCGGCTTAAAAAAAGGTCAAACGCGTCTCTTCGTATTGTGGAATAGAGCCAA
AACACCAAGTGGTGTCATTATAACATTGGGCTCACCAGCAACAGATGCTTTAGGTCGCTCCGGTATCGATGGTGATATTG
ATAATCATTGGTTTGAACGCCTCGGTTCCGCACTTCTTGTATCAATCGTTAGAGATGCAACAAATTATGCAAACGACTGG
ATAAATTTACCAAAACAACAAAAGGAAGAAAAAGAAACAACAAACATTCTCTCTGCAGGAGCAGATATATTCTCTTCAGG
AACATCAGGAATAGGGACCATCTCTGCAGGAGTAGATATGGCCAGAATGCTCGCAGAAAATTACATCAATATCCCTCCAA
CCCTAACTAAAAATCAGGGTGAAATGATCAATGTCTTTGTGGTGCGCGACCTCGATTTCTCCACTGTGTACAAATTAAAA
ATTATCGAAAATAACAAACAGATTATTCATCGTGCCTTTTCAGGGGACTTCAATAAAAACTCTATGGTAACTCCCAAATG
A

Protein sequence :
MNDEMDEISFNDRDTIKDRNRTEDRDTIKDNQGKKESFNVGKAIALLILFSVCIYLMYAILSTSKDTKKQPIELPKETTN
KQTELFQSVKPTLAPLELVDKNKTLLPKVELPTPTINQPESNNSDNKLLEAAQRAPVLAYSNPNQQQANTANNNDNNGAS
PSQNNNPDKTAQQFNQLLKPTKLDGIRASTLGNRNYIIAMGASIPCILETAVSSEQQGFVSCIVSRDILSDNGRVVLLDK
GTQIVGEYRAGLKKGQTRLFVLWNRAKTPSGVIITLGSPATDALGRSGIDGDIDNHWFERLGSALLVSIVRDATNYANDW
INLPKQQKEEKETTNILSAGADIFSSGTSGIGTISAGVDMARMLAENYINIPPTLTKNQGEMINVFVVRDLDFSTVYKLK
IIENNKQIIHRAFSGDFNKNSMVTPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 8e-115 62
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 2e-67 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB10 YP_004158890.1 type IV secretion system protein VirB10 VFG2239 Protein 7e-113 64