Gene Information

Name : virB4 (BARCL_0621)
Accession : YP_004158884.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB4
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 680095 - 682449 bp
Length : 2355 bp
Strand : +
Note : Evidence 1c : Function experimentally demonstrated in the studied genus; PubMedId : 12421311, 15554962; Product type e : enzyme

DNA sequence :
ATGTCAGTGATGAAGCGGGAATCTTTGCCTGAGGAATATATTCCCTATGTTCGTCATGTCAATCAACGTGTAATTGCGTT
GAATTCACGCTGCTTAATGACAGTGATTGCTATTGAAGGTATCAATTTTGATACTGCAGATATCACTCAATTAAATTCCT
TACATACCCAATTAAACACACTCTTGAAAAATATTGCAGATGAACGTGTTGCTTTATATTCTCATATCATTCGGCGACGG
GAAACGATTTATCCAGAGAGCCAATTTTTTTCATCTTTTGCAACAGTCTTAGATGAAGAATACAAACAGAAAATGATTTC
GAAAGATCTTTATCGGAATGATTTGTATCTTTCGATACTCTGGAATCCTGCAGCGGATAAAACTGAACAGTTGGCTACTT
TTTTTCATCGCTTAACACAAGCCAAGAAGACACAATCGGAACCAGATTTTGAAGCTATTCGGAAACTCGAAGAGTTAAGC
CAAGATCTTATACAAGGTCTGGAGAGCTATGAAGCACGGCTTTTGTCAACCTACGAACATGATGGGATTTTATTTTCTGA
ACAAAGTGAATTTCTTCACCAGTTAGTGGGAGGAAGGCGTGAACGCATTCCCCTTACATTTGGGACTATTGCCTCAACGA
TTTACTCAGATCGGGTTCTTTTTGGAAAAGAAATTATTGAAATTCGTCATGAAAGCAATGAACGCTTTGTAGGTATGTTT
GGATGGAAGGAATATCCCTCTAAAACGCGTCCAGGTATGACGGATGGTTTGTTGACAGCGCCCTTTGAATTGATCTTAAC
GCAATCCTTTGTTTTTAAAAGTAAAGCAGTTGCAAGTGCTATTATGAGCCGTAAACAAAATCAAATGATTAATGTGGCTG
ATCGAGCCAGCTCACAAATTGGTGCACTTGATGATGCACTTGATGATTTAGAATCTAATCGTTTTGTTTTGGGAGAACAT
CATCTCTCTTTAGCCGTTTTTTCTGATCATCCACAAGAATTAGCAGAACACCTCTCCAAAGCTCGTTCTTACCTGACGAA
CGGTGGAGCAGTTATAGCCAGAGAAGATCTAGGATTAGAGGCAGCATGGTGGGCTCAGCTTCCTGGAAACTTTAGCTATC
GAGCACGCTCTGGAGCCATTAGCAGCAGAAATTTTGCAGCCTTATCCCCGTTTCATTCCTTCCCTATTGGCAAATTGAAA
GGCAATGTTTGGGGTTCTGCCGTTGCTTTACTGCAAACACAAGCTGGTTCGCCTTACTATTTTAATTTTCATTATGGTGA
TGTTGGAAATACCTTTGTTTGCGGACCATCAGGCTCTGGGAAAACAGTTATTGTTAATTTTCTGCTTGCACAATCGCAAA
AATATAACCCAACAATAGTCTTTTTCGATAAAGATCAGGGCGCAGAAATCTTTGTACGTGCTGGAGGTGGAAAATATAAG
CCTTTGAAAAACGGCAAACCTACCAATATTGCACCATTAAAAGGCATGGAATACACCGAAAAAAATAAACTCTTTCTTCA
ACACTGGGTCTTAAAATTAGTCACCACCGAAGGCCAAACAGTGACAGAACAAGAACGACAAGACGTTGCTAGAGCAATTA
ATTCCTTAGAAAGCCTTCCCCTAGAACAACGCTCTCTCGGTGCACTTCAACTGTTTTTTGATAATACATCTACAGAAGGT
ATTGCCATGCGTTTAAAACGTTGGATCAAAGGCAATGCTTTAGGGTGGGTTTTTGATAATGATCACGATGATCTCAATTT
AGATGCCCAATTCATAGGTTATGATATGACGGATTTCTTAGATAATGAAGAAATTCGTCGCCCTTTGATGATGTATCTGT
TTAACCGCATCCTCGATCTTATTGATGGTCGGCGTATCATTATCGTTATCGATGAATTCTGGAAAGCTCTCGAAGATGAT
TCATTTAAAGCTTTTACCCAAGATCGTCTCAAAACAATTCGTAAACAAAATGGTATGATGCTCTTTGCAACACAAAGCCC
TAGAGATGCTTTGAATTCAACCATTGCCCACACAATTATTGAACAATGCCCCACCCAAATATTTTTTCCAAATCAAAAAG
CTAATTACAACGATTATGTTGAAAACTTTAAACTGACTGAACGTGAATTTGAATTAATCCAATCAGAATTAAGCAGAGAA
TCTCGGCGTTTTCTCATTAAACAAGGACAAAATTCCATTGTTGCAGAACTCAACTTACGGGGAATGGATAACGAAATTGC
TGTCTTAAGCGGAACAACCAGAAATATCGAACTCTTGAATCAAATTATAGGTGAATATGGAACCAATCCGGATATATGGC
TGCCTATATTTCATCAAAGGAGACGAACGCAATGA

Protein sequence :
MSVMKRESLPEEYIPYVRHVNQRVIALNSRCLMTVIAIEGINFDTADITQLNSLHTQLNTLLKNIADERVALYSHIIRRR
ETIYPESQFFSSFATVLDEEYKQKMISKDLYRNDLYLSILWNPAADKTEQLATFFHRLTQAKKTQSEPDFEAIRKLEELS
QDLIQGLESYEARLLSTYEHDGILFSEQSEFLHQLVGGRRERIPLTFGTIASTIYSDRVLFGKEIIEIRHESNERFVGMF
GWKEYPSKTRPGMTDGLLTAPFELILTQSFVFKSKAVASAIMSRKQNQMINVADRASSQIGALDDALDDLESNRFVLGEH
HLSLAVFSDHPQELAEHLSKARSYLTNGGAVIAREDLGLEAAWWAQLPGNFSYRARSGAISSRNFAALSPFHSFPIGKLK
GNVWGSAVALLQTQAGSPYYFNFHYGDVGNTFVCGPSGSGKTVIVNFLLAQSQKYNPTIVFFDKDQGAEIFVRAGGGKYK
PLKNGKPTNIAPLKGMEYTEKNKLFLQHWVLKLVTTEGQTVTEQERQDVARAINSLESLPLEQRSLGALQLFFDNTSTEG
IAMRLKRWIKGNALGWVFDNDHDDLNLDAQFIGYDMTDFLDNEEIRRPLMMYLFNRILDLIDGRRIIIVIDEFWKALEDD
SFKAFTQDRLKTIRKQNGMMLFATQSPRDALNSTIAHTIIEQCPTQIFFPNQKANYNDYVENFKLTEREFELIQSELSRE
SRRFLIKQGQNSIVAELNLRGMDNEIAVLSGTTRNIELLNQIIGEYGTNPDIWLPIFHQRRRTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB4 YP_001610000.1 VirB4 protein Virulence Not named Protein 0.0 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virB4 YP_004158884.1 type IV secretion system protein VirB4 VFG2233 Protein 0.0 88