Gene Information

Name : BARCL_0393 (BARCL_0393)
Accession : YP_004158660.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 426966 - 427652 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATACTCATTATCGAAGATGATCGTGAGACAGGGCGTTATCTCGAGAAAGCGTTTTTGGAAGCAGGACATGCAGC
TGATATTGCTTATGATGGAGATACTGGTTATACTTTGGCCGAAACAATAGATTATGACGTGATGGTTGTTGATCGCATGC
TTCCGCATCGTGATGGTCTTTCCATTGTTGCTGGGCTACGCGCAAAAGGCAACGAAACACCAGTTCTTATTCTTTCTGCT
TTAAGTCAGGTTGACGATCGTATAACCGGTTTACGTGCAGGGGGAGATGATTATCTAACGAAACCTTATGCTTTTTCTGA
ACTTCTTGCGCGTGTTGAAGTTTTGCAACGACGAAAAAATCCTAAAGAAGCAGAAACTGTTTATTGTGTTGGCGACCTTG
AGCTTGATCGGTTAGCGCATATAGTAAAACGTGGTGAAAAAAATATTGTATTGCAACCACGTGAATTTCGTTTGCTTGAA
TATTTAATGCGATATTCTGGTCAGGTTGTCACTCGTACAATGCTTTTGGAAAATGTTTGGGATTACCATTTTGATCCACA
AACAAATGTTATTGATGTTCATATATCTCGTTTAAGAGCAAAAATTGAAAAAGATTTTGATGTTCCACTTTTGCATACAG
TGCGTGGGGCGGGGTATATGCTGAAGGCACCAGACAAAAAAATATGA

Protein sequence : 
MKILIIEDDRETGRYLEKAFLEAGHAADIAYDGDTGYTLAETIDYDVMVVDRMLPHRDGLSIVAGLRAKGNETPVLILSA
LSQVDDRITGLRAGGDDYLTKPYAFSELLARVEVLQRRKNPKEAETVYCVGDLELDRLAHIVKRGEKNIVLQPREFRLLE
YLMRYSGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRAKIEKDFDVPLLHTVRGAGYMLKAPDKKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BARCL_0393 YP_004158660.1 two-component response regulator BAC0347 Protein 7e-48 49
BARCL_0393 YP_004158660.1 two-component response regulator BAC0083 Protein 9e-47 48
BARCL_0393 YP_004158660.1 two-component response regulator BAC0111 Protein 2e-52 48
BARCL_0393 YP_004158660.1 two-component response regulator BAC0125 Protein 8e-47 47
BARCL_0393 YP_004158660.1 two-component response regulator BAC0197 Protein 6e-43 46
BARCL_0393 YP_004158660.1 two-component response regulator BAC0308 Protein 1e-46 45
BARCL_0393 YP_004158660.1 two-component response regulator BAC0638 Protein 2e-39 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BARCL_0393 YP_004158660.1 two-component response regulator VFG0596 Protein 5e-37 43
BARCL_0393 YP_004158660.1 two-component response regulator VFG1389 Protein 2e-32 42