Gene Information

Name : xerD (BARCL_1354)
Accession : YP_004159584.1
Strain : Bartonella clarridgeiae 73
Genome accession: NC_014932
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1488018 - 1488956 bp
Length : 939 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAGTAGTGCTGTCATAGATCGTTTTCTTGAAATGATGAGTGCGGAGCGAGGAGCTTCTGTTCGTACACTTTTTGC
TTATCAACATGATTTACAATGGGCGCAAAATAAATTGTCTTCATACTCTCTTTCATTTTTTTCAGCACAAAGAGAAGATT
TGATAAATCTTTTATCTCTCATGCAGACTGCTGGTTGTGCTGCAACTTCACAAGCACGTCGTTTATCAACTTTACGTCAA
TTTTTCCAGTTTCTTTATGCTGAAGGATTAAGAGGAGATGATCCTTCTAGTGATATTGATTCACCTCGTCAAGGGCGTCC
TTTGCCAAAAATTATCAGCGAAGATGCGGTGACAAAATTACTTGATTTTGCACAGTTGGAGACAGATCAGGCAGAATATG
GATCCCAGGAATATTTTCGTGCTTTGCGTTTTCAGGTGTTGCTTGAAATGCTTTATGCAACAGGATTACGTATTAGTGAG
CTCGTGAGTCTTCCGGTTCAAGCTGTACGAAGGAAAGAACAATTTATTTTGGTTCGCGGTAAGGGTGAAAAAGAACGAGT
AGTACTTTTATCAGAGAAGGCACGCCAAATTCTGTCGAAGTGGTTGGTTTTGCGTGATCAAGGGAAAGATGCAAAAAGTT
TTTATCTTTTTCCTGCTCGTTCATCAACCGGATATATTGCGCGCCAATTTGTTGCCCGCGGATTAAAAGATCTCGCTAAA
AGAGCAGGAATACAGAGTGAAAACTTCTCTCCTCATGTGTTGCGTCACGCTTTTGCAAGTCATCTGTTGCAAAATGGTGC
TGATTTGCGTGCAGTTCAGCATTTATTAGGACATTGCGACATTTCTACAACCCAAGTTTATACACATGTATTAGAAGCTA
GGCTTCATCGTTTGGTTAATGAGCATCATCCGCTTGTTGATCAGTGTAAGGTTGAGTAA

Protein sequence :
MKSSAVIDRFLEMMSAERGASVRTLFAYQHDLQWAQNKLSSYSLSFFSAQREDLINLLSLMQTAGCAATSQARRLSTLRQ
FFQFLYAEGLRGDDPSSDIDSPRQGRPLPKIISEDAVTKLLDFAQLETDQAEYGSQEYFRALRFQVLLEMLYATGLRISE
LVSLPVQAVRRKEQFILVRGKGEKERVVLLSEKARQILSKWLVLRDQGKDAKSFYLFPARSSTGYIARQFVARGLKDLAK
RAGIQSENFSPHVLRHAFASHLLQNGADLRAVQHLLGHCDISTTQVYTHVLEARLHRLVNEHHPLVDQCKVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-35 41
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-35 41