|
Name : clpB (BARCL_1183) Accession : YP_004159425.1 Strain : Bartonella clarridgeiae 73 Genome accession: NC_014932 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease, atp-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1324478 - 1327069 bp Length : 2592 bp Strand : - Note : - DNA sequence : ATGAATTTGGAAAAATATAGCGAACGGCTTCAAGGTTTTTTACAAGCAGCGCAAAGCAGTGCTCTTTCTTCTGATCATCA GCAGTTTATGCCTGAACATTTCTTGAAAGTGCTCTTAGAAGATAGTCAAGGATTAGCAGTTTCTTTGATCCAAAAAGCAG GAGGAAATTTGCCTGCTATTCAAAAAGAACTCAAAGAAGCCCTCGATGCTTTGCCAAAAGTACAAGGCGGAAATGGACAA CTCTATATGTCTCAGCCTTTGGCAAAAGTCTTCGCAAAAGCAGAAGAAATTGCTCAAAAAGCAAACGATCAATTTGTGAC AGTGGAACGTGTTTTACAAGCTTTACTTCTCGAAAAAAGTGCAAAAACAGCCGACATTTTGACAATAGGAGGGGTGAAAG CTCAAGAGCTTGAGCAAGTCATCAATACAATGCGAAAGGGAAAAACTGCAACAAGTCGTCATGCCGAAAGCCAATATGAA GCCTTGGAAAAATATGCCCGTGATTTAACAAAAGAAGCACGGGAAGGAAAACTCGATCCTGTGATTGGACGAGAAGAAGA AATCAGAAGGACTATTCAAGTCTTATCACGTCGAACCAAAAATAATCCTGTGCTAATCGGAGAACCAGGAGTCGGGAAAA CCGCCATCGTCGAAGGATTAGCGCTCCGCATTGTCAATGGTGATGTGCCCGAAACATTGCGTGATAAACAACTCTATGCT CTCGATATGGGAGCTCTTATCGCTGGGGCAAAATATCGAGGTGAATTTGAAGAACGTTTGAAAGCTGTTCTCACAGATGT TCAAGCCGAAAATGGACAAATTATTCTCTTCATCGATGAATTACATAATCTCGTCGGAGCCGGGAAATCCGATGGACCTA TGGATGCTTCTAATTTGCTCAAACCCGCTCTCGCGCGTGGTGAACTCCATTGTGTGGGTGCTACAACGCTCGATGAATAT CGAAAATATGTCGAAAAAGATGCTGCTTTAGCTCGACGTTTCCAACCCGTCTTCGTTCCTGAGCCAACCGTCGAGGACAG TATCTCTATCTTGCGAGGAATCAAAGAAAAATACGAACAACATCACAAAGTACGATTGGCTGACAGTGCTTTGATTGCTG CTGCACGATTGTCTCAACGCTATATTGCCGATCGTTTCTTGCCCGATAAAGCTATCGATTTGATCGATGAAGCCGCCGCA CGTTTGCGGATGCAGGTCGATTCAAAACCAGAAGAACTCGATGCAATCGATCGACGCATCATGCAGTTGAAAATCGAACA GGAAGCTTTGAAAACAGAAGTTGATCCCGCAACAAAAGAACGCTTGAAAACTGTCAAAGCCGAACTCGAAACTTTGGAAA AAAGCTCAACAGAAATGACACAAGCTTGGCAAGCCGAAAAACAAAAATTAGGCTATGCTGCCGATCTGAAAAAACAACTC GAAGAAGCACGAAATGCTTTGGCTATTGCTCAACGAAATGGACAGTTCCAACGTGCTGGTGAACTTGCATATAGTGTCAT TCCTGAACTCGAAAAACAACTCAATGTCGCAGAAAATGACGACCAACAAAATAATCTGGTCGAAGAAATCGTTACTACAG AGCATATTGCTCAAATCGTTTCTCGTTGGACAGGAATCCCCGTCGATCGGATGCTCGAAGGTGAACGAGAAAAATTATTG CGGATGGAAGACGAAATCAGTAACCGAGTGGTGGGGCAAACCGAAGCCGTACAGGCTATCGCACGAGCTGTACGACGCGC ACGCGCCGGATTACAAGATCCTAACCGCCCTATCGGCTCCTTTATGTTCCTAGGACCAACAGGGGTCGGAAAAACAGAAC TCACAAAAGCTCTCGCTGCTTTTCTCTTCCAAGATGATCAGGCTATGTTGCGGATCGATATGTCCGAATATATGGAAAAG CATGCCGGAGCACGATTGATCGGTGCTCCTCCAGGATATATCGGATATGAAGAAGGAGGGATCCTCACAGAAGCTGTTAG ACGTAGACCATATCAGGTCATTCTCTTCGACGAAATTGAAAAAGCGCATCCCGATATTTTTAATCTCCTTCTTCAAGTGC TTGATGAAGGACGATTGACAGATAGTCAAGGACGAACCGTCGATTTTCGAAATACCGTCCTCATTATGACTTCTAATCTC GGAGCCGAGAGCTTGACAGCATTATCGGAAGGACAAATAACACAGCAAGCAAAAGAAGAAGTGATGCAAGTAGTCAAAGC TGCCTTCCGACCAGAATTCCTTAATCGCGTCGATGAAATTATCCTCTTTCAAAGATTACAACGCAAAGATATCGAAGCAA TCGTCGATATTCAAATTCAACACTTACAAAATTTGCTCAGTGAACGCAAAATTACCTTGCAGATCAAACCAGAAGCCCGA ACGTTGCTCGCTCATAAAGGCTATGATCCCCTCTATGGAGCTCGGCCGTTAAAACGAATGATGCAAAGAGAAATTCAGGA TCCCCTCGCAGAAAGCCTCTTAAAGGGGATAATCCGTGATGATACAACCGTGACGATTGCAAAAGAAGGAGAGCAATTGA TTTTTTCCTCTATAACAGAAAAAGAAAAATAA Protein sequence : MNLEKYSERLQGFLQAAQSSALSSDHQQFMPEHFLKVLLEDSQGLAVSLIQKAGGNLPAIQKELKEALDALPKVQGGNGQ LYMSQPLAKVFAKAEEIAQKANDQFVTVERVLQALLLEKSAKTADILTIGGVKAQELEQVINTMRKGKTATSRHAESQYE ALEKYARDLTKEAREGKLDPVIGREEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPETLRDKQLYA LDMGALIAGAKYRGEFEERLKAVLTDVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGELHCVGATTLDEY RKYVEKDAALARRFQPVFVPEPTVEDSISILRGIKEKYEQHHKVRLADSALIAAARLSQRYIADRFLPDKAIDLIDEAAA RLRMQVDSKPEELDAIDRRIMQLKIEQEALKTEVDPATKERLKTVKAELETLEKSSTEMTQAWQAEKQKLGYAADLKKQL EEARNALAIAQRNGQFQRAGELAYSVIPELEKQLNVAENDDQQNNLVEEIVTTEHIAQIVSRWTGIPVDRMLEGEREKLL RMEDEISNRVVGQTEAVQAIARAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAAFLFQDDQAMLRIDMSEYMEK HAGARLIGAPPGYIGYEEGGILTEAVRRRPYQVILFDEIEKAHPDIFNLLLQVLDEGRLTDSQGRTVDFRNTVLIMTSNL GAESLTALSEGQITQQAKEEVMQVVKAAFRPEFLNRVDEIILFQRLQRKDIEAIVDIQIQHLQNLLSERKITLQIKPEAR TLLAHKGYDPLYGARPLKRMMQREIQDPLAESLLKGIIRDDTTVTIAKEGEQLIFSSITEKEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004159425.1 | ATP-dependent clp protease, atp-binding subunit ClpB | VFG2076 | Protein | 6e-116 | 41 |
| clpB | YP_004159425.1 | ATP-dependent clp protease, atp-binding subunit ClpB | VFG2084 | Protein | 4e-110 | 41 |
