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Name : Varpa_0969 (Varpa_0969) Accession : YP_004153298.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : heat shock protein hslvu, ATPase subunit hslu Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1081500 - 1082828 bp Length : 1329 bp Strand : + Note : TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: vap:Vapar_0909 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase DNA sequence : ATGTCCATGACCCCCCATGAAATCGTTTCCGAGCTCGACAACCACATCGTCGGGCAGCCCGCCGCCAAGCGCGCGGTGGC CATCGCCCTGCGCAACCGCTGGCGCCGCCAGCAGGTCGACGAGAAGCTGCGCAGCGAAATCACCCCGAAGAACATCCTCA TGATCGGCCCGACGGGCGTGGGCAAGACCGAGATCGCCCGCCGTCTCGCGCGCCTGGCGGATGCGCCCTTCATCAAGGTC GAGGCGACCAAGTTCACCGAGGTGGGCTACGTTGGAAAAGACGTCGATTCGATCATTCGCGACCTCGCCGAAATCGCCGT CAAGCAGACCCGCGAATCCGAGAGCGCCAAGGTGCGCGCGCGCGCCGAGGACGCGGCCGAAGACCGCATCCTCGACGTGC TGCTGCCCCCGGCGCGCGGTGCCGACGGCGCGACCGCGGCAATCGATGGACCCAATCCCACGCGACAGGCTTTCCGCAAG AAGCTGCGCGAGCACCAGCTCGACGACAAGGAAATCGAACTCGACCTCGCCGAGACCCGCACGCCGCTCGAAATCATGGG CCCCGCTGGCATGGAGGAAATGACCGAGCAACTGCGCGGCATGTTCGGCCAGATGGGCGGCGGCAAGCGCAAGACGCGCA AGCTCAAGATCGCCGAGGCGCTGCGCCTCCTGATCGACGAGGAGGCCGCCAAGCTGGTCAACGAGGACGAGATCCGCGCG CAGGCGATCACCAACGCCGAGCAGAACGGCATCGTCTTCATCGACGAGATCGACAAGGTTGCGACGCGCAGCGAAGCGCA GGGCTCCGACGTGTCGAGGCAAGGCGTGCAGCGCGATTTGCTGCCGCTGGTCGAGGGCACGGCCGTGACCACCAAGTACG GCGTGGTGCGCACCGACCACATGCTGTTCATCGCGAGCGGCGCGTTCCACCTGAGCAAGCCGAGCGACCTGATCCCCGAG CTACAGGGGCGTTTTCCGATTCGTGTCGAGCTGCAATCGCTCTCGGTGTCGGACTTCGAAAGCATCCTCACGCAGACCCG CGCATCGCTCGTGAAACAGTACCAGGCGCTGCTCGCGACCGAGGGTGTGACGCTCGATTTCCAACCCGACGGCGTGACCC GCCTGGCGAGCATCGCCTTCGAGGTGAACGAGCGCACCGAGAACATCGGCGCGCGCCGTTTGTCGACCGTGATGGAGCGC CTGCTCGATGAGGTAAGCTTCGGCGCGGCCCGCATCGAGGGTCAGACGATCCGCATCGATGCCGCTTACGTCGACGAGCG CCTTGCGGCACTAAGTCACGACGAAGACCTCTCGCGCTTCATCCTCTGA Protein sequence : MSMTPHEIVSELDNHIVGQPAAKRAVAIALRNRWRRQQVDEKLRSEITPKNILMIGPTGVGKTEIARRLARLADAPFIKV EATKFTEVGYVGKDVDSIIRDLAEIAVKQTRESESAKVRARAEDAAEDRILDVLLPPARGADGATAAIDGPNPTRQAFRK KLREHQLDDKEIELDLAETRTPLEIMGPAGMEEMTEQLRGMFGQMGGGKRKTRKLKIAEALRLLIDEEAAKLVNEDEIRA QAITNAEQNGIVFIDEIDKVATRSEAQGSDVSRQGVQRDLLPLVEGTAVTTKYGVVRTDHMLFIASGAFHLSKPSDLIPE LQGRFPIRVELQSLSVSDFESILTQTRASLVKQYQALLATEGVTLDFQPDGVTRLASIAFEVNERTENIGARRLSTVMER LLDEVSFGAARIEGQTIRIDAAYVDERLAALSHDEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-94 | 45 |
