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Name : Varpa_0830 (Varpa_0830) Accession : YP_004153159.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase sdr Function : - COG functional category : R : General function prediction only COG ID : COG4221 EC number : - Position : 934092 - 934850 bp Length : 759 bp Strand : + Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_0808 short-chain dehydrogenase/reductase SDR DNA sequence : ATGACATCCGTTCAAGACAACATCAAGGGCAAGGTCGCCATCGTCACCGGCGCCAGCAGCGGCATCGGCGAATCCATGGC CCGCCACCTCGCCGCACGCGGCGCCAAGGTGGTGCTCGCGGCACGCCGCACGGACCGGCTCGACAAGGTGGTCGCCGAGA TTCGCGAGGCTGGCGGCGAAGCCGTTGCCATCGCCACTGACGTGTCCAAGCGCGCCGATCTGGAAAAGCTTGCCGCCGCC ACAGTCGAAACCTTCGGCCGCATCGACGTGCTGGTCAACAACGCGGGCGTGATGCCGCTGTCGCCGCTCGAGAAGCTCAA GGTCGACGAGTGGGACCGCACCATCGACGTCAACATCAAGGGCGTGCTCTACGGCATCGCCGCGGTGCTGCCGCGCATGC AGGCGCAGGGCAGCGGGCACATCCTGAACGTCGCGTCGATCGCGGGCATCAAGGTGTTCACGCCGATCGGTACGGTCTAC AGCGCGACCAAGCATGCGGTGCGCGCCATCTCCGAGGGCTTGCGCGTCGAAGTGGGCAACTCGGGCGTGCGCGTCACGAT CGTCTCGCCCGGCGCGGTCGATTCGGAACTGAAGCTCGGCAGCACCGATGCGGATGCCGCCGCGGGCCTGAAGGCGTTCT ACGACGCCAACCAGATTCCGGCCGATGCGGTCGCCCGTGCGGTGGTCTACGCGGTGGAGCAGCCGGCGAACGTGGACATC AACGAGGTGGTCGTGCGGCCGGTGTCACAGGACTTCTGA Protein sequence : MTSVQDNIKGKVAIVTGASSGIGESMARHLAARGAKVVLAARRTDRLDKVVAEIREAGGEAVAIATDVSKRADLEKLAAA TVETFGRIDVLVNNAGVMPLSPLEKLKVDEWDRTIDVNIKGVLYGIAAVLPRMQAQGSGHILNVASIAGIKVFTPIGTVY SATKHAVRAISEGLRVEVGNSGVRVTIVSPGAVDSELKLGSTDADAAAGLKAFYDANQIPADAVARAVVYAVEQPANVDI NEVVVRPVSQDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 5e-48 | 49 |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 4e-45 | 47 |
