|
Name : Varpa_0617 (Varpa_0617) Accession : YP_004152949.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 687856 - 689274 bp Length : 1419 bp Strand : + Note : PFAM: Aldehyde Dehydrogenase; KEGG: rhi:NGR_b06980 aldehyde dehydrogenase DNA sequence : ATGAACGACGCCCGCTTCTATATCGATGGATGCTGGCAAGACCGCACCGATGCCGCAGGCATTGCGGTCGTCGATCCGTT TACCGAAGAAGTCATCGGGCACGTTGCAGCGGGCTCGTCGACGGATGTGGACCTGGCCGTCGCCGCGGCCCGGAGGGCTT TCGAAACGTTTTCGCGAAGTTCCGTCGAGGCGCGGCTTGCGCTGCTGGGCCGAATCCTGGCGTTGCTGGAAGAACGCGCG GAGTTGTTCGCCCAAGCCATCGTGGCGGAGATGGGTGCGCCCATCGGATTCGCCAGGGCCGCCCATGTGCCCTTCGGCAT CGCGCATGTTCGCGCGCAGATGGAAGTGCTTCAGCGCTACAGGTTTCTTTCCTTGGATGGCAGCACCGCGATTTCGAAAG AGCCGATCGGCGTCTGCGCACTGATCACGCCGTGGAACTGGCCGCTGTATCAGATCACCGCCAAGGTCGCGCCGGCAATC GCCGCGGGTTGCACGGTCGTCCTGAAGCCCAGTGAGTTGTCGCCCTACAGTGCGCAGCTTTTCGCGCAGGTGATGCACGA CGCCGACACGCCGGCCGGCGTCTTCAACCTGGTCGGGGGCAGGGGAGAGGTGGTCGGTGCGGCACTGGCAGCGCATCCCG ATGTCGACATGATCTCCATCACCGGATCGACGCGCGCCGGCGTGCTCGTGGCCCAGGCCGCCGCGGTGACGGTGAAGCGC GTCGTGCAGGAACTGGGCGGCAAGTCGCCGAACCTGTTTCTGGACGACGCCGATTTCGAACAAGGCGTGGCCAAGGGCGT GCTGGCGGGAATGCGCAACGCGGGCCAGTCGTGCAGCGCGCCGACACGGATGCTGGTGCCCGCGTCGCGCCTGGCCGAGG TGGAAGCATTGGCGCAAGCGGCGGTGATGGGCATCAACGTTGGCGATCCACGCGACGAAAAAACCTCGATGGGTCCGATC GCAAACGCTGCGCAATATGCGAGGGTGCAGGAGATGATCGCCAGCGGCATAGAAGAGGGCGCCAAGCTGGTCTGCGGCGG TCCGGGCAGGCCGGCCGGTTTGACGCATGGCTACTTTGCACAGCCGACCGTGTTCTCCAACGTAACGCCCGACATGCGGG TGGCGCAGGAAGAAATATTCGGCCCCGTGCTGGTCATCATTCCGTATCGGGACGAGCAAGAGGCCATTGCGATTGCGAAC GACACGGTCTATGGCCTCGGTGCCAGCGTGCAGTCCGGCGACCGGGAGCGAGCGCAGCGCGTAGCCAGGCAAATTCGCGC CGGCCAGGTGCACATCAACTATCCGGCGTGGAACAGCCATGCGCCGTTCGGCGGATACAAGCGGTCCGGCAATGGCCGCG AATACGGCGTCCATGGGCTCGAGGAGTACCTCGAAACCAAGGCCATCCTCGGCTATTGA Protein sequence : MNDARFYIDGCWQDRTDAAGIAVVDPFTEEVIGHVAAGSSTDVDLAVAAARRAFETFSRSSVEARLALLGRILALLEERA ELFAQAIVAEMGAPIGFARAAHVPFGIAHVRAQMEVLQRYRFLSLDGSTAISKEPIGVCALITPWNWPLYQITAKVAPAI AAGCTVVLKPSELSPYSAQLFAQVMHDADTPAGVFNLVGGRGEVVGAALAAHPDVDMISITGSTRAGVLVAQAAAVTVKR VVQELGGKSPNLFLDDADFEQGVAKGVLAGMRNAGQSCSAPTRMLVPASRLAEVEALAQAAVMGINVGDPRDEKTSMGPI ANAAQYARVQEMIASGIEEGAKLVCGGPGRPAGLTHGYFAQPTVFSNVTPDMRVAQEEIFGPVLVIIPYRDEQEAIAIAN DTVYGLGASVQSGDRERAQRVARQIRAGQVHINYPAWNSHAPFGGYKRSGNGREYGVHGLEEYLETKAILGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_0617 | YP_004152949.1 | aldehyde dehydrogenase | VFG0082 | Protein | 7e-49 | 42 |
