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Name : Varpa_0615 (Varpa_0615) Accession : YP_004152947.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : succinic semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 685761 - 687239 bp Length : 1479 bp Strand : + Note : KEGG: vap:Vapar_5639 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase DNA sequence : ATGCCACTCACCCTTCAACGCCAGGACCTGCTGCCGGGCCTTCATCTCATCGGCGCCGAATGGCGCGACGCCAGCGATGC GCGCCGCCTCGACGTGACCGACCCCGCCACCGACAGCGTCTTCGCGAGCGTGCCCGACGGCACGGCCGCCGATGCGCGCG CCGCGGTCGATGCGGCGCATGCCGCCTTTCCCGCCTGGCGCGCCGTGCCGGCCAAGCAGCGCGCGCAGATCCTCAAGCGC TGGAACGACCTGATGCTCCTGCACCAGGAAGACCTGGGCCGCCTGATCTCGCGCGAACAGGGCAAGCCGCTGGCCGAGGG CCGCGGTGAAGTGGCTTATGCGGCCAGCTATGTCGAGTGGTTCGCCGAAGAGGCCACGCGCGCCAACGGCGAGGTGATTC CCGCGCCGGTGAGCGGCCGCCGCATGCTCGCGCTGAAGGAGCCCGTGGGCGTGGTCGCCGCGATCACGCCGTGGAATTTC CCGGCCGCGATGATCGCGCGCAAGATCGCCCCCGCGCTCGCTGCGGGCTGCACCGTGGTCTGCAAGCCGGCCGAAGACAC GCCGCTGACTTCGCTCGCGCTCGTGAAGCTGGCCCAGGAAGCGGGCGTGCCGGCAGGCGTGCTCAACATCGTCACCGCCT CGCGCGAACGCACGCCCGAGGTGGTCGATGTGTGGCTGGCCGATGCGCGCGTGCGCAAGATCAGCTTCACCGGCTCGACA CCCGTCGGCAAGCACCTCGCGCGCGCCTCGGCCGATACGTTGAAGAAGCTGTCGCTCGAACTCGGCGGCAACGCGCCCTT CATCGTGTTCGAAGACGCCGACATCGATGCCGCGGTCGAGGGCCTGATGGCCGCCAAGTTCCGCAACGGCGGCCAGACCT GCGTGTGCCCGAACCGCGTGTTCGTGCAGGCCAAGGTGCACGACGCCTTCGTCGACAAGCTGGCGGCGCGCGTCGGTGCG CTCCAGGTCGGCCCGGCCACCGAACCCGATTCGCAGATCGGCCCGATGATCAACGCGCGCGCCGTGGACAAGATGGAGCG CCACGTGCGTGATGCCGTGTCCCGCGGCGCGCGCATCGCGGTCGGCGGCGAGCGGCTGCGTTCGGCGCGCTGCGACGGCC CCAACTACTACGCGCCGACCGTGCTGGTGAATGCCGACGCCAGCATGGAATGCAGCTGCGAGGAGACCTTCGGGCCGGTG GTTCCGGTCACGCGCTTCGAGACCGAGGCCGAGGTGATCGCCGCCGCCAACGACACGCCCTTCGGCCTTGCCGCCTACTT CTATTCGACCGACGCGCGCCGCATCTGGCGCGTGACCGAGGCGCTCGAATCGGGCATCGTCGGCGTCAACGAGGGCGCGC TGGCCGCCGAGGCGGCGCCCTTCGGCGGCGTGAAGGAATCGGGCTACGGGCGCGAAGGCTCGGTGCATGGCCTGGACGAC TACATGCACATCAAGTACGTGTGCCAGGGGCAGCTTTAA Protein sequence : MPLTLQRQDLLPGLHLIGAEWRDASDARRLDVTDPATDSVFASVPDGTAADARAAVDAAHAAFPAWRAVPAKQRAQILKR WNDLMLLHQEDLGRLISREQGKPLAEGRGEVAYAASYVEWFAEEATRANGEVIPAPVSGRRMLALKEPVGVVAAITPWNF PAAMIARKIAPALAAGCTVVCKPAEDTPLTSLALVKLAQEAGVPAGVLNIVTASRERTPEVVDVWLADARVRKISFTGST PVGKHLARASADTLKKLSLELGGNAPFIVFEDADIDAAVEGLMAAKFRNGGQTCVCPNRVFVQAKVHDAFVDKLAARVGA LQVGPATEPDSQIGPMINARAVDKMERHVRDAVSRGARIAVGGERLRSARCDGPNYYAPTVLVNADASMECSCEETFGPV VPVTRFETEAEVIAAANDTPFGLAAYFYSTDARRIWRVTEALESGIVGVNEGALAAEAAPFGGVKESGYGREGSVHGLDD YMHIKYVCQGQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-127 | 58 |
