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Name : Varpa_0585 (Varpa_0585) Accession : YP_004152917.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : EvpB family type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 653074 - 654567 bp Length : 1494 bp Strand : - Note : KEGG: vap:Vapar_0549 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 DNA sequence : ATGGCCGAAGCACTCGAGCAGAGCGCACTCAAGGACGTTGCCTATGCGGGCAGCGACTTTTCGTCGCTCCTTCAAAAGGA ATTCAAGCCGCGCAGCGACGAAGCCAAGAGCGCCGTCGAAGCCGCCGTGCTCACGCTCGCGCAGCAGGCGCTGAGCAACA GCACCGTCATCGGCAAGGATGTGACCAAGTCGATCCAGGCCATGATCGCCGCGATCGACGCGAAGCTCACCGAGCAGGTC AACAAGATCATTCACCACCCCGACTACCAGAAGCTCGAGAGTGCGTGGCGCGGCCTGCACTACATGGTGAACAACACCGA GACCGACGAGCACCTGAAGATCCGGGTGATGGACATCTCGAAGACGGACCTCGCCAAGAGCCTGAAGAAGTTCAAGGGCG CGGCGTGGGACCAGAGCCCGATGTTCAAGAAGATCTACGAACAGGAATACGGTCAGTTCGGCGGCGAGCCCTTCGGCGCG CTGGTGGGCGACTACCACTTCGACCAGAGCCCGCCCGACATCGAGCTGCTCGGCGAGATGTCCAAGATCGCGGCCTCGGC GCATGCGCCCTTCATCACCGGCGCGAGCCCCAACCTGATGCAGATGGAGTCATGGCAGGAGCTCGCGAACCCGCGCGACC TGACCAAGATCTTCCTCACGCCCGAGTACGCCGGCTGGCGGTCGCTGCGGGATTCAGACGACGCCAAGTACCTGGGCCTG TGCATGCCGCGCTTTCTTGCGCGCACGCCCTACGGCGCCAACACCAACCCGGTGGAGGAGTTCGACTTCGAGGAAGACAC CGCCGGCGCCGACCACAGCAAGTACGCCTGGGCCAACGCCGCGTATGCGATGGCGACCAACATCAACCGCTCGTACAAGC TCTACGGCTGGGGTTCGCGCATCCGCGGCATCGAGTCGGGCGGCGCGGTGGAAAACCTGCCGCTGCACACCTTCCCGAGC GACGACGGCGGCGTGGACCAGAAGTGCCCGACCGAAATCGCCATCAGCGACCGGCGCGAAGCCGAGCTCTCCAAGGCCGG CCTGCTCTCGCTGATTCACCGCAAGAACTCCGACTTCGCGGCCTTCATCGGTGCGCAATCGCTGCACAAGCCGGCCGAGT ACGACGACCCGGACGCGACGGCCAACGCCAACCTCGCGGCGCGCCTGCCCTACCTCTTTGCCTGCAACCGCTTTGCGCAC TACCTGAAGTGCATCGTGCGCGACAAGGTCGGCAGCTTCAAGGAGCGCGACGACATGCAGCGCTGGCTCAACAAATGGAT CATGAATTACGTGGACGGCGATCCCGTCAACTCGTCCGAGGAGACCAAGGCCCGCAAGCCCCTGGCCGCGGCCGAGGTGG TGGTGGAAGAGGTCGAGGGCAACCCCGGCTACTACACCTCCAAGTTCTTCCTGCGCCCGCACTACCAGCTCGAAGGCCTC ACGGTGTCGCTGCGGCTGGTGTCCAAGCTGCCCTCGGCCAAGGGCGGCAAGTAA Protein sequence : MAEALEQSALKDVAYAGSDFSSLLQKEFKPRSDEAKSAVEAAVLTLAQQALSNSTVIGKDVTKSIQAMIAAIDAKLTEQV NKIIHHPDYQKLESAWRGLHYMVNNTETDEHLKIRVMDISKTDLAKSLKKFKGAAWDQSPMFKKIYEQEYGQFGGEPFGA LVGDYHFDQSPPDIELLGEMSKIAASAHAPFITGASPNLMQMESWQELANPRDLTKIFLTPEYAGWRSLRDSDDAKYLGL CMPRFLARTPYGANTNPVEEFDFEEDTAGADHSKYAWANAAYAMATNINRSYKLYGWGSRIRGIESGGAVENLPLHTFPS DDGGVDQKCPTEIAISDRREAELSKAGLLSLIHRKNSDFAAFIGAQSLHKPAEYDDPDATANANLAARLPYLFACNRFAH YLKCIVRDKVGSFKERDDMQRWLNKWIMNYVDGDPVNSSEETKARKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQLEGL TVSLRLVSKLPSAKGGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-79 | 41 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 4e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_0585 | YP_004152917.1 | EvpB family type VI secretion protein | VFG2070 | Protein | 4e-179 | 77 |
| Varpa_0585 | YP_004152917.1 | EvpB family type VI secretion protein | VFG2093 | Protein | 2e-83 | 42 |
| Varpa_0585 | YP_004152917.1 | EvpB family type VI secretion protein | VFG2475 | Protein | 9e-82 | 41 |
