Gene Information

Name : Varpa_0584 (Varpa_0584)
Accession : YP_004152916.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 652454 - 652936 bp
Length : 483 bp
Strand : -
Note : PFAM: protein of unknown function DUF796; KEGG: vap:Vapar_0548 protein of unknown function DUF796

DNA sequence :

ATGGCTGCAGACATGTTTTTGAAGCTCGAAGGCGTCGACGGCGAATCCAAGGACGATTCGCACAAGAAGGAAATCGACGT
TCTCGCCTGGAGCTGGGGTGCCAGCCAGTCCGGCACCGGCCACGTGGGCGGCGGCTCGGGCGCCGGCAAGGTGAGCGTGC
AGGACGTTTCGATCACCAAGTACGTCGACTCTTCCTCGCACCTGCTGCTCCTGGATTGCTGCAATGGCCAGCACATCAAG
AAGGGCACGCTGGTGGTGCGCAAGGCCGGCGCCACGCCGCTCGAATACGTCAAGCTCACGATGGAAGACATCCTGGTGAG
CAGCATCCAGACCGGCGGCAGCGGCGGTGAAGACCGCCTGACCGAGACCCTGACGCTGAACTTCTCCAAGTTCAAGTACG
AGTACACGCCCCAGAAGGCCGACGGTTCCGGCGACGGCACCAAGGAAACGGGCTGGGACATCGCAGCCAACAAGAAGGTC
TGA

Protein sequence :

MAADMFLKLEGVDGESKDDSHKKEIDVLAWSWGASQSGTGHVGGGSGAGKVSVQDVSITKYVDSSSHLLLLDCCNGQHIK
KGTLVVRKAGATPLEYVKLTMEDILVSSIQTGGSGGEDRLTETLTLNFSKFKYEYTPQKADGSGDGTKETGWDIAANKKV

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	2e-23	47

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Varpa_0584	YP_004152916.1	hypothetical protein	VFG2071	Protein	1e-23	57