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Name : Varpa_5786 (Varpa_5786) Accession : YP_004158049.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase recg Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 6292202 - 6294328 bp Length : 2127 bp Strand : - Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: vap:Vapar_5068 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase dom DNA sequence : GTGCCCGCCAAGAAAGCTCCCTCCAAGTCCGCGGACGCCGCCACCGCGCCGTCGCCACCGCAGCCGCCCGGCACCGGCCT GAGCCTCGTGCAGCGCGCCCTGCGCAAGCTCGGCCTCGTGCGCGACATCGACTTCGCGCTCTACCTCCCGATGCGCTACG AGGACGAGACCCGCATCGTCAAGCTCGCCGACACGCGCGACGGCGACATGGCGCAGGTCGAGGGCGTGGTCACCGAGTGC GAGGTGGTGTATCGCCCGCGCCGCCAGCTGATTGCCACCATCGACGACGGCAGCGACACCTGCCAGTTGCGCTTCTTCAA CTTCTACCCGTCGCAGCAGAAGCAGCTCGCGGTCGGCGCGCGGGTGCGCGTGCGGGGCGAGATGCGCGGCGGCTTCGTGG GGCGGCAGATCATGCATCCCACGGTCAAGGCCGCGGGCACCTCGCTGCCGGAGGCGCTCACGCCGGTGTATTCGACCGTG GCCGGCCTCGCACAGCCGGTGCTGCGACGCGAGGTGCGTTCGGGCCTCGCACGCGCGGTGCTCGACGAGACGATTCCCGT GCAGATCGGCCTGGGCGGCGCATGGGACCTGCGCAGTTCGCTCACCTTCCTGCACTACCCCACGCCCGACGTGGCGATGG CGACGCTGGAAGATCACAGCCACCCGGCCTGGCAGCGCATCAAGGCCGAGGAGCTGCTCGCGCAGCAGCTCTCGCAATTG CAGGCCCGCATGGAACGCGCCGCCCAACGTGCCCCGGTGCTGCCTTCGTCGCCGGAACCCGTGGCGACGTCGCTGCATGC GCAACTGCTCGCGGTGCTGCCCTTCGGCCTGACCGGTGCGCAGCAGCGTGTAGGCGAAGAGATCACGCGCGACCTCGGCC GCGAGATTCCGATGCACCGGCTCCTGCAAGGCGACGTCGGTTCGGGCAAGACCGTGGTGGCGGCGCTGGCGGCGGCGCGA GCCATCGACGCGGGCTTCCAGTGCGCGCTGATGGCGCCGACCGAAATCCTCGCGGCGCAGCACTTCGGCAAGCTCGTGGG CTGGCTCGATCCACTGCTGGCCGAGCGCGGCCTGCGCGTGGCCTGGCTCACCGGCAGCCAGAAGAAGAAAGAGCGCGACG CGATGTCGGCCGCCGTCGAGAGCGGCGAGGCCGCGCTGGTCATCGGCACGCACGCGGTCATCTCGGAGAAGGTGCGCTTC AAGAACCTCGCGCTCGCGATCATCGACGAGCAGCACCGCTTCGGCGTGGCGCAGCGCCTTGCATTGCGCGGCAAGGCGGT GGGCCACCTCGAACCGCACCTGCTGATGATGAGCGCCACCCCGATTCCGCGCACGCTCGCGATGAGCTACTACGCCGACC TGGACGTCTCCACGCTCGACGAGCTGCCGCCGGGCCGCACGCCCATCGTCACCAAGCTGGTGGCCGACCACCGGCGCGAC GAGGTGATCGACCGCATCCAGGCGCAGATCGCGCAGGGCCGGCAGGTCTACTGGGTGTGTCCGCTGATCGAGGAAAGCGA GGCGGTCGACCTGCGCAACGCCACCGAAACGCGCGACGAACTCGCCGGGACGCTGGGCGAGGCCGTCCATGTCGGCCTGC TGCATTCGCGCATGCCCACGGCCGAGAAGCAGGCGGTGATGGCCGCCTTCACCGCCAACGAGATTCAGGTGCTGGTGAGC ACGACGGTGATCGAAGTGGGCGTCGATGTGCCGAACGCCTCGTTGATGGTGATCGAGCATGCGGAGCGTTTCGGGCTTTC GCAGTTGCACCAGTTGCGCGGGCGCGTGGGGCGCGGCGCGGCGGCTTCGGCTTGCGTGCTGCTCTACGCGCCGGGCGACA GTGGCCGCGTGGGCGAGGCGGCGCGCGCGCGGCTCAAGGCGATGGCCGAGACGGGCGACGGCTTCGAGATCGCGCGGCGC GACCTGGAGATTCGCGGCCCTGGCGAATTCCTGGGCGCTCGCCAGTCGGGGGCGCCGCTGTTGCGCTTCGCCGACCTGAC CACCGACACGCTGCTGCTCGACTGGGCCCGTGAACTCGCACCGGTGATGCTCGAGAAGCACCCTGACCTGGCCCAGCGGC ACATCGACCGCTGGCTGGGCACCAAGGCCGAGTACCTGAAAGCCTGA Protein sequence : MPAKKAPSKSADAATAPSPPQPPGTGLSLVQRALRKLGLVRDIDFALYLPMRYEDETRIVKLADTRDGDMAQVEGVVTEC EVVYRPRRQLIATIDDGSDTCQLRFFNFYPSQQKQLAVGARVRVRGEMRGGFVGRQIMHPTVKAAGTSLPEALTPVYSTV AGLAQPVLRREVRSGLARAVLDETIPVQIGLGGAWDLRSSLTFLHYPTPDVAMATLEDHSHPAWQRIKAEELLAQQLSQL QARMERAAQRAPVLPSSPEPVATSLHAQLLAVLPFGLTGAQQRVGEEITRDLGREIPMHRLLQGDVGSGKTVVAALAAAR AIDAGFQCALMAPTEILAAQHFGKLVGWLDPLLAERGLRVAWLTGSQKKKERDAMSAAVESGEAALVIGTHAVISEKVRF KNLALAIIDEQHRFGVAQRLALRGKAVGHLEPHLLMMSATPIPRTLAMSYYADLDVSTLDELPPGRTPIVTKLVADHRRD EVIDRIQAQIAQGRQVYWVCPLIEESEAVDLRNATETRDELAGTLGEAVHVGLLHSRMPTAEKQAVMAAFTANEIQVLVS TTVIEVGVDVPNASLMVIEHAERFGLSQLHQLRGRVGRGAAASACVLLYAPGDSGRVGEAARARLKAMAETGDGFEIARR DLEIRGPGEFLGARQSGAPLLRFADLTTDTLLLDWARELAPVMLEKHPDLAQRHIDRWLGTKAEYLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-90 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_5786 | YP_004158049.1 | ATP-dependent DNA helicase recg | BAC0356 | Protein | 2e-123 | 49 |
