|
Name : Varpa_5695 (Varpa_5695) Accession : YP_004157959.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 6186549 - 6188357 bp Length : 1809 bp Strand : - Note : TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: vap:Vapar_4995 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit DNA sequence : ATGACCGCGTCCGCCTGGGGCCTGCTGGCCCTCTTTCTCGCCGCGCTCGCCGTGCTGGCCTGGCCCGTTGGCAAATTCCT CGCCGCGCTCTGCAACGAGCGCGTGCCGCGCTGGATGCAGCGCGTCGAGGCGCCGCTCTACAAGCTCGCGGGCACCGCCC CCGAGCGCTCGATGAACTGGCGCACCTATGCGCTGGCGCTCCTGGCCTTCAACCTCTTGGGCGCCGTTGTCGTCTATGCG CTGCAGCGCCTGCAGGGCGTGCTGCCGCTCAACCCGGCCGGCATGGGCGCGGTGTCGGCCGACTCGGCCTTCAACACCGC GGTGAGCTTCGTCAGCAACACCAACTGGCAGGGCTACGCCGGTGAATCGACCATGAGCTATCTCACGCAGATGCTCGGTC TCACGGTGCAGAACTTCTTCTCCGCCGCCACCGGCATCGCGGTTGCCTTCGCGCTGGTGCGCGGCTTCGCGCGCCGCGGA GATGGCGCCGGAAGCAAGGGCCTGGTCGGCAACTTCTGGGCCGACATCACCCGCGTCACGCTGTGGGTGCTGGTGCCGCT GTCGTTCGTGCTCGCGGTCTTCTTCGTGGGCCAGGGCGTGATCCAGAACTTCGATGCCTACAAGGACGTGGCCACCGTCG AGACCACCGCCTTCCAGCAGCCGAAGAACGGCGCCGACGGCCAGCCGCTCAAGGACGAGAAGGGCGCCCCGGTGATGGAA GACGCCACCACCAGGACGCAGACCCTCGCCATGGGCCCGGTCGCGTCGCAGGAAGCGATCAAGATGATCGGCACCAACGG TGGCGGCTTCTTCAACGCCAACTCGGCGCACCCCTACGAGAACCCGACCGCGCTCAGCAACCTGCTGCAGATGATCGCGA TCTTCCTGATTCCGGCGGCCCTGTGCTTCGCCTTCGGCCGTGTCGTCGGCGACATGCGCCAGGGCTGGGCCGTGCTCGCG GCGATGACGGTCATGTTCGTCGTCGCGGTGATGGTGATCACGCCGGCCGAGCAGGGCGGCAATCCGTTGTTCGCATCACT CGGCGTCGACCAGGTGTCCAGCGCATTGCAGAGCGGCGGCAACATGGAAGGCAAGGAAGTGCGCTTCGGCATCGACGCCT CGGCGCTCTTCGCCGCCATCACGACCGCGGCCTCGTGCGGCGCGGTGAACGCGATGCACGACTCGCTCACCCCGCTCGGC GGCATGGTGCCGATGGTGCTCATGCAGCTTGGTGAAGTGGTGTTCGGCGGCGTCGGCAGCGGCCTCTACGGCATGCTGAT CTTCGCGATGCTCGCGGTGTTCATCGCGGGTCTCATGATCGGCCGCACGCCCGAGTACCTGGGCAAGAAGATCGAGGTGC GCGAGATGAAGCTCATCTCCATCGCGATCCTGGTCACGCCGATCCTGGTGCTGGCCGGCACCGCGGTGGCGGTGATCGCA GGCGCCGGCAAGGCCGGCATCGCGAACCCCGGTGCGCACGGCTTCTCGGAAATCCTCTATGCGTTGACCTCGGCCGCCAA CAACAACGGCAGCGCCTTCGCCGGCCTCTCGGCCAACACGCCGTTCTACAACGGCCTGCTCGGCCTCGCCATGTGGCTCG GCCGCTTCGCGATGATCGTGCCGGTGCTGGCCATTGCCGGCTCGCTGGCCGCCAAGAAGCGCCTGCCCGTCACCAGCGGC ACGCTGCCCACGCACGGCCCGCTGTTCGTCTCCTTGCTGATCGGCACCGTGCTGCTGGTCGGCTTGCTCAACTACGTGCC GGCGCTGGCCCTCGGGCCGATCGTCGAACACCTGGTGCTCTGGAAATAA Protein sequence : MTASAWGLLALFLAALAVLAWPVGKFLAALCNERVPRWMQRVEAPLYKLAGTAPERSMNWRTYALALLAFNLLGAVVVYA LQRLQGVLPLNPAGMGAVSADSAFNTAVSFVSNTNWQGYAGESTMSYLTQMLGLTVQNFFSAATGIAVAFALVRGFARRG DGAGSKGLVGNFWADITRVTLWVLVPLSFVLAVFFVGQGVIQNFDAYKDVATVETTAFQQPKNGADGQPLKDEKGAPVME DATTRTQTLAMGPVASQEAIKMIGTNGGGFFNANSAHPYENPTALSNLLQMIAIFLIPAALCFAFGRVVGDMRQGWAVLA AMTVMFVVAVMVITPAEQGGNPLFASLGVDQVSSALQSGGNMEGKEVRFGIDASALFAAITTAASCGAVNAMHDSLTPLG GMVPMVLMQLGEVVFGGVGSGLYGMLIFAMLAVFIAGLMIGRTPEYLGKKIEVREMKLISIAILVTPILVLAGTAVAVIA GAGKAGIANPGAHGFSEILYALTSAANNNGSAFAGLSANTPFYNGLLGLAMWLGRFAMIVPVLAIAGSLAAKKRLPVTSG TLPTHGPLFVSLLIGTVLLVGLLNYVPALALGPIVEHLVLWK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 3e-68 | 45 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 2e-68 | 45 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 43 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-57 | 43 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 4e-57 | 43 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 43 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 43 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-57 | 43 |
