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Name : Varpa_5657 (Varpa_5657) Accession : YP_004157921.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 6144174 - 6145514 bp Length : 1341 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: xcv:XCV1594 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGAAGCTCGCCATCTTCGGCGCCGGTTATGTGGGCCTCAGCTTCGCCGCCTGCATGGCCGAAGCCGGGCACGAGGTGCT GTGTGCAGACGCCGATGCGAGCCGCATCGAAGGCTTGCAGCAGGGGCAGATGCCGTTGCACGAGCCGGGCTTGGAGGCGC TGGTCGCAGAAGGGCTTGCCGCGGGACGATTGCGTTTCACGGCCGACGAGTGCGCGGCGAGCCTGCATGGCGACGTGCTC TTCATCGTGGTCAACACACCGGCCGATGCCGAGGGCGAGGTCGACCTGCAGCACGTGATGGCCGTGGCGCGCAGCGTCGG GCAACACCGCGATCGCGACGCCGTGGTCGTCTGCAAGTCCACCGCGCCGGTCGGCACCGCGGAGCAGGTCGAGGCCGTGC TGCGCGACGAGCTTTCGCAACGCGGTGCGGTGCATCGCATCGCGGTGGCGGTGAACCCCGAGTTCCTGCGCGAAGGCTCG GCCGTGCGCGACTGCCGGCAGCCCGACCGCGTCGTGATCGGTGCTGCCGATCCCGCGGCCATCGACCTGTTGACGCAGCT CTACGCGCCCTTCGTCACAGACCCCGCGAAGCAACTGCTGGTGATGGACCGGCGTTCGGCCGAACTCACCAAGTACGCCG CCAACGCGATGCTCGCCACCCGCATCAGCTTCATGAACGAAATGGCGCGCGTGGCCGGGCATGCGGGGGCCGACATCGAG ATGGTGCGGCGCGGCATCGGTTCGGACCGGCGCATCGGCCCCGACTTCCTGCAGGCCGGCGCGGGCTACGGCGGCTCGTG CCTGGCGAAGGATGTGCGGGCGCTTCGGCATGCAGCCGATCGCGATGGGCAGGTGTTGCGCATCCTCTCGGCTGTCGAGG CGGCGAACCATGAGCAGAAGGGCCGGCTGTTCGACCTGATGACGCACCACTTCGAAGGCGACATCGCGCACAAGACCATC GCGCTTTGGGGCCTGGCCTTCAAGCCCGACACCGACGACATGCGCGATGCGCCGAGCCTGGTGCTGCTGGAGCGCTTGTG GGCAGCGGGCGCACGCGTGCAGGTGCACGACCCGGCGGCAATGCCGAATGCGCGCGCCATCGTCGGCGAGCGCAGCGATG TGCGCTGGTGCGACACGCCCGAAGACGCGCTGGAAGGCGCCGACGTTTTGGCGCTGGTGACCGAATGGCCGGTGTTCCGT CGCCCCGATTTCGCGCGCATCGCGAGCACGCTGAAGACGCCCGCGATCTTCGACGGCCGCAACATCTACGACGCCGCCGA AGTCGAAGCCGCCGGCATCGCCTACTACGGCATCGGCCGCGGGCGTTCAGTGCTGCGCTGA Protein sequence : MKLAIFGAGYVGLSFAACMAEAGHEVLCADADASRIEGLQQGQMPLHEPGLEALVAEGLAAGRLRFTADECAASLHGDVL FIVVNTPADAEGEVDLQHVMAVARSVGQHRDRDAVVVCKSTAPVGTAEQVEAVLRDELSQRGAVHRIAVAVNPEFLREGS AVRDCRQPDRVVIGAADPAAIDLLTQLYAPFVTDPAKQLLVMDRRSAELTKYAANAMLATRISFMNEMARVAGHAGADIE MVRRGIGSDRRIGPDFLQAGAGYGGSCLAKDVRALRHAADRDGQVLRILSAVEAANHEQKGRLFDLMTHHFEGDIAHKTI ALWGLAFKPDTDDMRDAPSLVLLERLWAAGARVQVHDPAAMPNARAIVGERSDVRWCDTPEDALEGADVLALVTEWPVFR RPDFARIASTLKTPAIFDGRNIYDAAEVEAAGIAYYGIGRGRSVLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-42 | 41 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-42 | 41 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 8e-42 | 41 |
