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Name : Varpa_5612 (Varpa_5612) Accession : YP_004157877.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase sdr Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 6097971 - 6098717 bp Length : 747 bp Strand : + Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_4932 short-chain dehydrogenase/reductase SDR DNA sequence : TTGAATCCAGTGCTACTCATCACCGGCGGCGGACGGGGCATCGGCGCCGCCACCGCCCTGCTCGCCGCACGGCGCGGCTA CGCGGTGGCCGTCAACTACGCCAGCAACTCGCTGGCGGCCGACGAGGTGGTGCGCACCATCCGCGAGGGCGGCGGCACCG CCATCGCCGTGCAGGCCGATGTAGGCAATGAGGCGCAGGTGATCGCGATGTTCGAGAAGGTCGACGCCAAGCTCGGCCGG CTCACCGCGCTGGTCAACAACGCCGGCGTGGTGGACATGCAGGCGCGTGTCGACGAGATGAGCGTGGCGCGGCTGGAACG CATGTTCCGCATCAACGTGATCGGCAGTTTTGTCTGCGCGCGCGAAGCCGTTCGCCGCATGAGCACGAAGCACGGCGGCC AGGGCGGCGCCATCGTCAACATCTCCAGCGGCGCCGCGCGCCTGGGCTCGCCGGGCCAATACGTCGACTACGCCGCCAGC AAGGCCGCCATCGACACGCTCACCATCGGGCTGGCCAAGGAAGTGGGCGACGAGGGCATCCGCGTCAACGCGGTGCGCCC CGGCCTCATCGACACCGAGATCCACGCGTCGGGCGGCATGCCCGACCGCGCCCTCGAACTTGCGCCCACCGTCCCGATGA AGCGCACCGGCAGCCCCGAGGAAATCGCCGGCGCCATCCTGTGGCTGCTGTCCGACGAGGCGAGCTACACCACCATGGCC CTGCTCGACGTGACCGGCGGAAGGTAG Protein sequence : MNPVLLITGGGRGIGAATALLAARRGYAVAVNYASNSLAADEVVRTIREGGGTAIAVQADVGNEAQVIAMFEKVDAKLGR LTALVNNAGVVDMQARVDEMSVARLERMFRINVIGSFVCAREAVRRMSTKHGGQGGAIVNISSGAARLGSPGQYVDYAAS KAAIDTLTIGLAKEVGDEGIRVNAVRPGLIDTEIHASGGMPDRALELAPTVPMKRTGSPEEIAGAILWLLSDEASYTTMA LLDVTGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 2e-59 | 57 |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 6e-58 | 55 |
