Gene Information

Name : Varpa_5236 (Varpa_5236)
Accession : YP_004157503.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Virulence
Product : glutathione s-transferase domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0625
EC number : -
Position : 5694039 - 5694713 bp
Length : 675 bp
Strand : -
Note : PFAM: Glutathione S-transferase domain; KEGG: vap:Vapar_4634 glutathione transferase

DNA sequence :
ATGCTCACCGTTCACCACCTCAACAATTCGCGCTCGCAGCGCGTGCTCTGGCTGCTCGAAGAGCTCGAACTGCCGTACGA
GATCGCTCACTACCAGCGCGATGCGCAAACCATGTTGGCGCCCGCTTCGCTCAAAGCCATTCACCCGCTTGGCAAGTCGC
CTGTGGTGACGACCGACGACGGCCTCACGCTCGCGGAGTCGGGCGCGATCATCGAGACGGTGATCGAGCGCTACGGCCAC
GGCCGCCTCGCGCCCGCGGCCGGCACGCCGGAGGCTTTGCGCTACCGCTACTGGATGCATTTCGCCGAAGGCACGGCGAT
GTCGCCGCTTCTGCTCAAGCTGATCTTCGACCGCATCGAGACGACGAAGATGCCCTTCTTCGCGAAGCCCATCGCCAAGG
CCATCGCGGCCAAGACCAAAGGCGCTTTCATCAACCCGAACATCGCGAGCCATCTGAGCTACATGGAGTCCGAACTCGGC
AAGAGCGAATGGTTCGCCGGCGATGAATTCAGCGGCGCCGATATCCAGATGAGTTTCGTGATCGAAGCTGCGCAGGCGCG
CGGCGGGCTCGATGCGAAGCGGCCGAAGCTGATGGCGTACCTGGAGCGCATCCACGCGCGTGCGGCCTACAAGCGTGCGC
TGGAGCGCGGCGGTCCCTACGGCCTGTTGAGCTGA

Protein sequence :
MLTVHHLNNSRSQRVLWLLEELELPYEIAHYQRDAQTMLAPASLKAIHPLGKSPVVTTDDGLTLAESGAIIETVIERYGH
GRLAPAAGTPEALRYRYWMHFAEGTAMSPLLLKLIFDRIETTKMPFFAKPIAKAIAAKTKGAFINPNIASHLSYMESELG
KSEWFAGDEFSGADIQMSFVIEAAQARGGLDAKRPKLMAYLERIHARAAYKRALERGGPYGLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gstA NP_791192.1 glutathione S-transferase Virulence Hrp PAI Protein 1e-34 48
gstA AAF71510.1 GstA Not tested Hrp PAI Protein 7e-35 48