|
Name : Varpa_5129 (Varpa_5129) Accession : YP_004157399.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : transposase is3/is911 family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 5580624 - 5581016 bp Length : 393 bp Strand : - Note : PFAM: transposase IS3/IS911 family protein; KEGG: ctt:CtCNB1_3809 transposase IS3/IS911 DNA sequence : GTGAGTACGACTAGAAATACGGATACCGTCGAAGTGATCATGAGGGACCAGCGCCGCAGGCGCTGGTCCCTTGCAGAGAA GGCCGCGCTGGTTCGTCGAAGCTACGAACCTGGCATGAGCGTGTCGCTCGTCGCACGTCAGGAAGGCGTTGCCGCCAGCC TGCTGTTCCAGTGGCGCAAGCTGGAGCGGCAAGGGGCGCTGACGGCTGTATCGGCGGGCGAGGCTGTGGTGCCGGCTTCG GAACTGGCAGCCGCTCGTGCCGAGATCGCCAAGCTACAGCGCGTGCTTGGCAAGAAGACGCTGGAGAACGAGATCCTCAA GGAAGCTGTGGAGTACGCCGCGGAAAAAAAATGGATTGCGCGCTCGCCCTTGCTGGACGGGGACGGCCAGTGA Protein sequence : MSTTRNTDTVEVIMRDQRRRRWSLAEKAALVRRSYEPGMSVSLVARQEGVAASLLFQWRKLERQGALTAVSAGEAVVPAS ELAAARAEIAKLQRVLGKKTLENEILKEAVEYAAEKKWIARSPLLDGDGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| insC | YP_854262.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-18 | 67 |
| c5196 | NP_757044.1 | transposase insC | Not tested | PAI II CFT073 | Protein | 5e-18 | 67 |
| insC | AAZ04431.1 | IS2 conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 3e-18 | 67 |
| unnamed | AAL57520.1 | IS2 transposase | Not tested | LEE | Protein | 1e-26 | 66 |
| st02 | CAC81840.1 | ST02 protein | Not tested | LEE II | Protein | 1e-26 | 66 |
| ECO26_5247 | YP_003232129.1 | insertion sequence 2 OrfA protein | Not tested | LEE | Protein | 2e-26 | 66 |
| S3188 | NP_838471.2 | insertion sequence 2 OrfA protein | Not tested | SHI-1 | Protein | 2e-26 | 66 |
| S4060 | NP_839229.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 2e-26 | 66 |
| tnpG | AAD44740.1 | TnpG | Not tested | SHI-2 | Protein | 1e-26 | 66 |
| SF2984 | NP_708758.3 | IS2 ORF1 | Not tested | SHI-1 | Protein | 2e-26 | 66 |
| aec50 | AAW51733.1 | Aec50 | Not tested | AGI-3 | Protein | 1e-26 | 66 |
| S4049 | NP_839217.2 | insertion sequence 2 OrfA protein | Not tested | SHI-2 | Protein | 6e-26 | 65 |
| SF3709 | NP_709448.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 7e-26 | 65 |
| SF3722 | NP_709461.3 | IS2 ORF1 | Not tested | SHI-2 | Protein | 7e-26 | 65 |
| unnamed | AAL67376.1 | insertion sequence protein | Not tested | PAI II CFT073 | Protein | 2e-14 | 55 |
| insC | YP_002414034.1 | IS2 insertion element repressor InsA; KpLE2 phage-like element | Not tested | Not named | Protein | 3e-14 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_5129 | YP_004157399.1 | transposase is3/is911 family protein | VFG0648 | Protein | 6e-27 | 66 |
| Varpa_5129 | YP_004157399.1 | transposase is3/is911 family protein | VFG0622 | Protein | 2e-26 | 65 |
| Varpa_5129 | YP_004157399.1 | transposase is3/is911 family protein | VFG0609 | Protein | 2e-26 | 65 |
| Varpa_5129 | YP_004157399.1 | transposase is3/is911 family protein | VFG1733 | Protein | 1e-14 | 55 |
