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Name : Varpa_5090 (Varpa_5090) Accession : YP_004157361.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit i Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : - Position : 5534027 - 5535700 bp Length : 1674 bp Strand : + Note : KEGG: vap:Vapar_4391 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I DNA sequence : ATGAGCACATTTCCCGGCCCCGCCCATCCGGTTCACCCCGCAGCACCGGGCGTCCACGACGCACATGGCACGCACGACGC GAATGACGCACACGACGAGCACCACGCCATGCCCTTCGGCTGGCGCCGCTGGGTGCTCGCCACCAACCACAAGGACATCG GCACGCTCTACCTGCTGTTCAGCCTCGCCATGCTGATGGTCGGCGGCGTGCTCGCGCTGGGCATCCGCGCCGAGCTGTTC CAGCCGGGGCTGCAGCTGCTCAATCCCGAGCTCTACAACCAGTTCGTGACCATCCACGGCCTGGTGATGGTGTTCGGCGC GATCATGCCGGCCTTCGTGGGCTTCGCGAACTGGATGGTGCCCCTGCAGGTCGGCGCCTCGGACATGGCCTTCGCGCGCA TGAACAACTTCAGCTTCTGGCTGCTGCCGCCCGCGGCGGTGATGCTGGTCGCGCCCTTCTTCAGCGCCGGCGGCGCGGCC GCCTCGGGCTGGACGCTGTACCCGCCGCTCAGCCTGCAGATGGGCCCGGCGATGGACTTCGGCATCTTCGCGGTCCACAT CATGGGCGCGAGCTCGATCATGGGCGCCATCAACATCATCGTCACCATCCTGAATATGCGCGCGCCGGGCATGACGCTCA TGAAGATGCCGATGTTCTGCTGGACCTGGCTCATCACCGCCTATCTGCTGATCGCGGTGATGCCGGTGCTCGCGGGCGCG GTGACGATGCTGCTGACCGACCGCCACTTCGGCACCAGCTTCTTCCAGCCGTCGGGCGGCGGCGATCCGGTGCTGTTCCA GCACATCTTCTGGTTCTTCGGCCATCCGGAGGTCTACATCATGATCCTGCCGGCCTTCGGGATCATCAGCCAGGTGGTGC CGGCGTTCTCGCGCAAGCGGCTCTTCGGCTACTCCTCGATGGTGTACGCGACGGCCTCCATCGCGATCCTCTCGTTCATC GTGTGGGCGCACCACATGTTCACCACCGGCATGCCGGTGACCGGCCAGCTGTTCTTCATGTACGCGACCATGCTGGTGGC GGTGCCGACGGCGGTGAAGGTGTTCAACTGGATCGCCACGATGTGGGAGGGATCGCTCAGCTTCGAGACGCCGATGCTGT TCGCGCTGGGCTTCATCTTCGTGTTCTCCATCGGCGGGCTCTCGGGCGTGATCCTGTCGATCGCGCCGATCGACATCCAG CTGCACGACACCCACTACGTGGTGGCGCACTTCCATTACGTGCTGGTGGCGGGCTCGCTGTTCGCGATGTTCGCGGGCTA TTACTACTGGTCGCCGAAATGGACCGGCGTGATGTATGCCGAGCGGCGCGGGCAGATCCATTTCTGGGTGTCGCTCGCGA GCTTCAACGTGGGCTTCTTCCCGCTGCATTTCCTCGGGCTGGCGGGCATGCCCAGGCGCTATGCCGACTACCCGATGCAG TTCTCCGACTTCAACCACGTCGCCAGCATCGGCGCCGCGGTGTTCGGCCTGGCACAGGCGTATTTCCTCTTCTTCATCGT GCTGCCGGCCATGGCCAAGCGCGGCGCACCGGCACCCGCGAAGCCCTGGGAAGGCGCGGAGGGCCTGGAATGGGAAGTTC CCTCGCCCGCGCCCTTCCACACCTTCGCCACGCCGCCGAAGCTGGACAGCACCGCGACGCGCGTGATGGGTTGA Protein sequence : MSTFPGPAHPVHPAAPGVHDAHGTHDANDAHDEHHAMPFGWRRWVLATNHKDIGTLYLLFSLAMLMVGGVLALGIRAELF QPGLQLLNPELYNQFVTIHGLVMVFGAIMPAFVGFANWMVPLQVGASDMAFARMNNFSFWLLPPAAVMLVAPFFSAGGAA ASGWTLYPPLSLQMGPAMDFGIFAVHIMGASSIMGAINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGA VTMLLTDRHFGTSFFQPSGGGDPVLFQHIFWFFGHPEVYIMILPAFGIISQVVPAFSRKRLFGYSSMVYATASIAILSFI VWAHHMFTTGMPVTGQLFFMYATMLVAVPTAVKVFNWIATMWEGSLSFETPMLFALGFIFVFSIGGLSGVILSIAPIDIQ LHDTHYVVAHFHYVLVAGSLFAMFAGYYYWSPKWTGVMYAERRGQIHFWVSLASFNVGFFPLHFLGLAGMPRRYADYPMQ FSDFNHVASIGAAVFGLAQAYFLFFIVLPAMAKRGAPAPAKPWEGAEGLEWEVPSPAPFHTFATPPKLDSTATRVMG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 1e-97 | 46 |
