|
Name : Varpa_5053 (Varpa_5053) Accession : YP_004157324.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit i Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : - Position : 5501797 - 5503437 bp Length : 1641 bp Strand : - Note : KEGG: vap:Vapar_4391 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I DNA sequence : ATGAGTGCAGTCCTCGACCCCCACGGTCACGCCCACGGCGACCACGCACACGACGGCCACGACGAGCATCACGCGGCACC CACCGGCTGGCGCCGCTGGGTCTTCGCGACCAACCACAAGGACATCGGCACGCTCTACCTGCTGTTCAGCTTCACGATGC TGATGGTGGGCGGCATCCTGGCCCTCCTGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAACTGGTGAACCCCGAGCTC TTCAACCAGTTCACCACCATGCACGGCCTGATCATGGTGTTCGGCGCCATCATGCCGGCCTTCGTGGGCTTCGCGAACTG GATGATCCCGCTGCAGGTGGGCGCTTCCGACATGGCGTTCGCGCGCATGAACAACTTCAGCTTTTGGCTGCTGATTCCCG CGGCGCTGATGCTGGTGGGTTCGTTCTTCATGCCCGGCGGCGCACCCGCTGCGGGCTGGACGCTCTACGCGCCGCTCACG CTGCAGATGGGCCCCTCGATGGACGCTGGCATTTTCGCGATGCACATCATGGGCGCCTCGTCGATCATGGGCTCGATCAA CATCATCGTGACCATCCTCAACATGCGCGCCCCCGGCATGACGCTGATGAAGATGCCGATGTTCTGCTGGACCTGGCTCA TCACTGCCTACCTGCTGATCGCCGTGATGCCGGTGCTCGCAGGCGCCATCACGATGACGCTGACCGACCGCCACTTCGGC ACCAGCTTCTTCAACCCCGCCGGCGGCGGCGACCCGGTGATGTACCAGCACATCTTCTGGTTCTTCGGCCACCCCGAGGT CTACATCATGATCTTGCCGGCCTTCGGCATCATCAGCCAGGTGGTGCCGGCCTTCGCCCGCAAGAAGCTCTTCGGCTACG CCTCGATGGTGTACGCCACCTCGTCGATTGCCATCCTGTCGTTCATCGTGTGGGCGCACCACATGTTCACGACCGGCATG CCGCTCACCGGCCAGTTGTTCTTCATGTACGCGACCATGCTGATCGCGGTGCCCACGGCCGTGAAGATCTTCAACTGGAT CGCCACGATGTGGCAGGGCTCGATGACCTTCGAGACGCCCATGCTGTTCGCGGTCGGCTTCATCTTCGTGTTCACGATGG GCGGCTTCACCGGCCTCATCCTCGCGGTCGCGCCGATCGACACGCAGCTGCAGGACACGTATTACGTGGTGGCCCACTTC CACTACGTGCTGGTAGCCGGCTCGCTGTTCGCCATGTTCTCGGGCTTCTACTACTGGGTGCCCAAGTGGACCGGCGTGAT GTACAACGAAACGCGCGGCAAGGTGCACTTCTGGTGGTCGCTGATCTCGTTCAACGTGACCTTCTTCCCGATGCACTTCC TGGGCCTCGCGGGCATGCCGCGACGCTACGCCGACTACCCGATGCAGTTCGCCGACTTCAACGCGCTCGCTTCGGTCGGT GCCTTCTTCTTTGGCTTCGCGCAGGTGTACTTCTTCCTCTTCGTCGTGCTGCCGACCATGCGCGGCAAGGGCGAGAAGGC TTCGCAGAAGCCGTGGGAAGCGGCTGAAGGCCTTGAGTGGGAAGTGCCGTCGCCGGCCCCGTTCCACACCTTCGAGAATC CGCCCAAGCTCGACGCGACCGCCACCAAGGTGATCGGCTGA Protein sequence : MSAVLDPHGHAHGDHAHDGHDEHHAAPTGWRRWVFATNHKDIGTLYLLFSFTMLMVGGILALLIRAELFQPGLQLVNPEL FNQFTTMHGLIMVFGAIMPAFVGFANWMIPLQVGASDMAFARMNNFSFWLLIPAALMLVGSFFMPGGAPAAGWTLYAPLT LQMGPSMDAGIFAMHIMGASSIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFG TSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIISQVVPAFARKKLFGYASMVYATSSIAILSFIVWAHHMFTTGM PLTGQLFFMYATMLIAVPTAVKIFNWIATMWQGSMTFETPMLFAVGFIFVFTMGGFTGLILAVAPIDTQLQDTYYVVAHF HYVLVAGSLFAMFSGFYYWVPKWTGVMYNETRGKVHFWWSLISFNVTFFPMHFLGLAGMPRRYADYPMQFADFNALASVG AFFFGFAQVYFFLFVVLPTMRGKGEKASQKPWEAAEGLEWEVPSPAPFHTFENPPKLDATATKVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 3e-99 | 47 |
