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Name : Varpa_4957 (Varpa_4957) Accession : YP_004157228.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : ribonuclease ph Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 5382738 - 5383469 bp Length : 732 bp Strand : - Note : TIGRFAM: ribonuclease PH; KEGG: vap:Vapar_4325 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 DNA sequence : ATGACTGCTTTCACCCGAAGCGGCGGCCGTGCCGCCGACCAGCTGCGCCCCGTTCGCATCACCCGCGGCTTCACCATTCA CGCCGAGGGCTCGGTGCTCATCGAGTTCGGCCAGACCCGCGTGCTGTGCACTGCCTCGGTGGAAGAGCGCGTCCCCCCGC ACAAGAAGGGCAGCGGCGAAGGCTGGGTGACCGCTGAATACGGCATGCTGCCGCGCGCCACCCACACCCGCAGCAGCCGC GAGGCCGCCAAGGGCAAGCAGACCGGCCGCACGCAGGAAATCCAGCGCCTCATCGGCCGCTCGATGCGCGCCGTGTTCGA CCTCGCCGCCTTGGGCGAGCGCACCATCCACCTCGACTGCGACGTGCTGCAGGCCGATGGCGGCACGCGCACCGCGGCCA TCACCGGCGCCTTCGTTGCTGCACAAGACGCGGTCAACAAACTGCTGGCCGCTGGCACGCTGAAAGCCTCGCCGATCAAG GGCCACGTGGCTGCCATCTCGGTAGGCATCGTCGGCGGCACGCCGCTGCTGGACCTCGAATACACCGAAGACTCGAGCTG CGACACCGACATGAACGTCGTCATGACCGGCGCCGGCCATTTCGTCGAAGTGCAGGGCACGGCCGAGGGCGTGGCGTTCA CGCGCGAAGAAATGAACCTCCTGCTCGGCCTGGCCGAAAAGGGCATCGGCGAACTCGTCACCCTGCAGAAGCAGGCATTG CAGCCGAACTGA Protein sequence : MTAFTRSGGRAADQLRPVRITRGFTIHAEGSVLIEFGQTRVLCTASVEERVPPHKKGSGEGWVTAEYGMLPRATHTRSSR EAAKGKQTGRTQEIQRLIGRSMRAVFDLAALGERTIHLDCDVLQADGGTRTAAITGAFVAAQDAVNKLLAAGTLKASPIK GHVAAISVGIVGGTPLLDLEYTEDSSCDTDMNVVMTGAGHFVEVQGTAEGVAFTREEMNLLLGLAEKGIGELVTLQKQAL QPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 6e-67 | 60 |
