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Name : Varpa_4858 (Varpa_4858) Accession : YP_004157130.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 5276953 - 5278671 bp Length : 1719 bp Strand : + Note : TIGRFAM: urease, alpha subunit; KEGG: vap:Vapar_4243 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein DNA sequence : ATGGCCACCATCGGGCGACGCGCCTATGCAGAAATCTTCGGCCCCACCGTGGGCGACCGGGTCCGCCTTGCAGACACCGA GCTGCTGATCGAAGTCGAGGCCGACTACACGCTGCGTGCCGGCGGCTACGGCGAAGAAGTGAAGTTCGGCGGCGGCAAGA CGATTCGCGACGGCATGGCGCAATCGCAGCGCACCCGCGCGCAAGGCGCCGTCGACACCGTGCTCACCAACGCGCTCATC CTCGACCACTGGGGCATCGTGAAAGCCGACATCGGGCTCAAGGACGGCCGCATCGCCGCCATCGGCAAGGCCGGCAACCC CGACGTGCAACCGGGCGTGGACATCGTCATCGGCCCGGGCACCGAAATCATCAGTTGCGAAGGCAACATCGTCACCGCGG GCGGCATCGACAGCCACATCCACTTCATCTGCCCGCAGCAGATCGAAGAGGCGCTGTCTTCCGGCGTGACGACGATGCTC GGTGGCGGCACCGGCCCCGCCACCGGCACCTTCGCGACCACCGCCACGCCCGGCCCCTGGCACATCGAGCGCATGCTGCA GGCGGCCGATGCGTTCCCGATGAACCTGGGCTTCCTCGGCAAGGGCAATGCGAGCCTGCCGGATGCGCTGCACGAGCAGA TCGAGGCCGGCGTCATCGGCCTGAAGCTGCACGAGGACTGGGGCACCACGCCCGCGGCCATCAGCAATTGCCTCGATGTG GCCGACGCCACCGACACGCAGGTGGCGATCCACAGCGACACGCTCAACGAATCGGGCTTTGTCGAGAACACCATCGCCGC CGTGGGTGGCCGCGCGATCTGCGCGTTCCACACCGAAGGCGCGGGTGGCGGCCATGCACCGGACATCCTGCGCGTGGTGG GCGAGGCGAACTTCCTGCCGTCGTCCACCAACCCCACGATGCCCTACACCGTGAACACGCTCGACGAGCACGTCGACATG CTCATGGTGTGCCACCACCTCGATGCAGGAATCGCCGAAGACCTGGCCTTCGCCGAGTCGCGCATCCGCAAGGAAACCAT CGCCGCCGAAGACGTGCTGCACGACCTCGGCGCAATCAGCATGTTCAGCTCCGACAGCCAGGCCATGGGCCGCGTCGGCG AGGTGATCATCCGCACCTGGCAGACCGCGCACAAGATGAAGGTGCAGCGCGGCACGCTCCCCGAAGACAGCGAACGCAAC GACAACTTCCGCGCGAAGCGCTACGTCGCCAAGTACACGATCAACCCGGCGATCGCGCACGGCATCGCGCACGAGGTGGG CTCGCTGGAAGTCGGCAAGTGGGCCGACATCGTGATCTGGAAGCCCGCCTTCTTCGGCGTGAAGCCCTTCACCATCCTGA AGGGCGGCACGATTGCGATGGCCGCGATGGGCGACCCGAGCGCGTCGATCCCGACGCCGCAGCCGGTGCACTTTCGCCCG ATGTTCGGCGCGTACGGCGGCTCGCTCGCGAAGAGCTCGCTCACCTTCGTCTCGCAGGCCGGGCTCGCCTCGGGCATCAA GGAGCGCTACGGTTTAGCCAAGCACCTCTGCGCGGTGAAGAACATCCGCAACGTGCGCAAAGGCGACCTGATCCACAACG GCTATACGCCGAAGATGGAAATCGATGCGCAGACCTACGCGGTGCGCGCCGACGGGCATCTGCTGACCTGCGAGCCGGCG AAGCTGCTGCCGATGGCGCAGCGGTATTTCCTGTTCTAG Protein sequence : MATIGRRAYAEIFGPTVGDRVRLADTELLIEVEADYTLRAGGYGEEVKFGGGKTIRDGMAQSQRTRAQGAVDTVLTNALI LDHWGIVKADIGLKDGRIAAIGKAGNPDVQPGVDIVIGPGTEIISCEGNIVTAGGIDSHIHFICPQQIEEALSSGVTTML GGGTGPATGTFATTATPGPWHIERMLQAADAFPMNLGFLGKGNASLPDALHEQIEAGVIGLKLHEDWGTTPAAISNCLDV ADATDTQVAIHSDTLNESGFVENTIAAVGGRAICAFHTEGAGGGHAPDILRVVGEANFLPSSTNPTMPYTVNTLDEHVDM LMVCHHLDAGIAEDLAFAESRIRKETIAAEDVLHDLGAISMFSSDSQAMGRVGEVIIRTWQTAHKMKVQRGTLPEDSERN DNFRAKRYVAKYTINPAIAHGIAHEVGSLEVGKWADIVIWKPAFFGVKPFTILKGGTIAMAAMGDPSASIPTPQPVHFRP MFGAYGGSLAKSSLTFVSQAGLASGIKERYGLAKHLCAVKNIRNVRKGDLIHNGYTPKMEIDAQTYAVRADGHLLTCEPA KLLPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 9e-172 | 70 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 9e-172 | 70 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-150 | 60 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 6e-150 | 60 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-150 | 60 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-150 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_4858 | YP_004157130.1 | urease subunit alpha | VFG0270 | Protein | 6e-142 | 60 |
