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Name : Varpa_4857 (Varpa_4857) Accession : YP_004157129.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0832 EC number : 3.5.1.5 Position : 5276644 - 5276949 bp Length : 306 bp Strand : + Note : TIGRFAM: urease, beta subunit; KEGG: vap:Vapar_4242 urease, beta subunit; PFAM: Urease beta subunit DNA sequence : ATGACCCCCGGCGAACTCCTCACCGACAACGGCGACCACACGCTCAACCCCGGCCGCCGCACCCTCACCCTGGTGGTGCA GAACACCGCCGACCGGCCGATCCAGGTCGGCTCGCACTATCACTTCGCCGAGACCAACGGCGCCCTCGGTTTCGACCGCG AAGCCGCGCGCGGCATGCGCCTGAACATCGCCTCGGGCGCCGCGGTGCGCTTCGAGCCGGGGCAGCAGCGCACGGTCGAA CTCGTCGATTACTCGGGCGATCGCATCGTCTACGGCTTTCGCGGCCTGGTTCAAGGAAAGCTCTAA Protein sequence : MTPGELLTDNGDHTLNPGRRTLTLVVQNTADRPIQVGSHYHFAETNGALGFDREAARGMRLNIASGAAVRFEPGQQRTVE LVDYSGDRIVYGFRGLVQGKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureB | NP_286679.1 | urease subunit beta | Virulence | TAI | Protein | 1e-23 | 65 |
| ureB | NP_287087.1 | urease subunit beta | Not tested | TAI | Protein | 1e-23 | 65 |
| ureB | YP_003784326.1 | urease subunit beta | Not tested | PiCp 7 | Protein | 1e-25 | 58 |
| ureB | YP_005682175.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 8e-26 | 58 |
| ureB | YP_005684267.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 8e-26 | 58 |
| ureB | YP_005686359.1 | Urease beta subunit | Not tested | PiCp 7 | Protein | 8e-26 | 58 |
