|
Name : Varpa_4855 (Varpa_4855) Accession : YP_004157127.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : urease subunit gamma Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0831 EC number : 3.5.1.5 Position : 5275713 - 5276015 bp Length : 303 bp Strand : + Note : TIGRFAM: urease, gamma subunit; KEGG: vap:Vapar_4240 urease subunit gamma; PFAM: Urease gamma subunit region DNA sequence : ATGGAACTGACCCCGCGCGAAAAAGACAAGCTGCTGATCTTCACCGCGGCGCTGCTCGCCGAACGCCGCAAGGCCCGCGG CCTGAAGCTCAACTACCCTGAAGCCATCGCGCTGATTTCCGCCGCCGTGATGGAAGGCGCCCGCGACGGCAAGAGCGTCG CCGAACTCATGAGCGACGGGCGCTCGGTGCTGACCCGCGCCGACGTCATGGACGGCATCGCCGAGATGATCCCGGACATC CAGGTCGAAGCCACCTTTCCGGACGGGACCAAGCTGGTCACCGTCCACCAGCCCATCGTCTGA Protein sequence : MELTPREKDKLLIFTAALLAERRKARGLKLNYPEAIALISAAVMEGARDGKSVAELMSDGRSVLTRADVMDGIAEMIPDI QVEATFPDGTKLVTVHQPIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureA | NP_287086.1 | urease subunit gamma | Not tested | TAI | Protein | 6e-31 | 82 |
| ureA | NP_286678.1 | urease subunit gamma | Virulence | TAI | Protein | 6e-31 | 82 |
| ureA | YP_005682176.1 | urease subunit gamma | Not tested | PiCp 7 | Protein | 1e-30 | 70 |
| ureA | YP_005684268.1 | urease subunit gamma | Not tested | PiCp 7 | Protein | 1e-30 | 70 |
| ureA | YP_003784327.1 | urease subunit gamma | Not tested | PiCp 7 | Protein | 1e-30 | 70 |
| ureA | YP_005686360.1 | urease subunit gamma | Not tested | PiCp 7 | Protein | 1e-30 | 70 |
