Gene Information

Name : Varpa_4765 (Varpa_4765)
Accession : YP_004157037.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide pyrophosphorylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0157
EC number : 2.4.2.19
Position : 5187118 - 5187996 bp
Length : 879 bp
Strand : -
Note : TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: vap:Vapar_4098 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase

DNA sequence :
ATGAGCCTTCGCTTCGATTTTTCAGCGTCGGCCGTGGCCGCGCTGGCCCTGTCCGACGCCACGCGCGCCCTGCAGGAAGA
CGTCGCCGACGGCGACCTCACCGCATCCCTGGTCGATCCCGCCCGCAAGGCGCGCGCCCGCGTGCTGGCGCGCGAAGCCG
CCGTGGTGTGTGGCGCGCCCTGGGTCGAGGCGACGATCAGGCAACTCGATCCCGAGGCCCGCATCACCTGGCTCTGCGCC
GAAGGCGAACGCTGCGCGGCCGACCAGACCGTGCTGGAAATCGAAGGCACCGCCCGCGCGCTGCTGACGGCCGAGCGCAC
CTCGCTCAACTTCCTGCAACTGCTGAGCGCGGTCGCCACCAAGACCGCGCTGTACGCCGACGCCGTCGAAGGCACGCGCG
CCCGCATCGTCGACACCCGCAAGACGCTGCCCGGCCTGCGCCTCGCGCAGAAGTACGCCGTGCGCACCGGCGGCGGGCTG
AACCACCGCATCGGCCTCTACGACGCGGTGCTCATCAAGGAAAACCACATCGTCGCGGCCGGCGGTGTCGCCGCGGCGCT
GCGCTCGGTGGCGCCGGGGGCTTCGCAGGCCGACTTCGTCGAAGTCGAGGTCGAAACGCTGGCCCAGTTGCGCGAGGCGC
TCGGCGCCGGCGCGCGCATGGTGCTGCTCGACAACATGGACCTGCCCACGCTGCGCGAGGCCGTCCGCATCAACGACGAA
GCGGGCGCTGACCGCAAGGCCGTGCTCGAGATTTCGGGCGGTGTCACGCTCGAGGGCCTGCGCGCCCTGGCCGAGACGGG
TGTCGACCGTATCTCGGTCGGTGCGTTGACCAAGGATGTCAAAGCCATCGATTTCTCGATGCGTTTCCAGGAAAGCTGA

Protein sequence :
MSLRFDFSASAVAALALSDATRALQEDVADGDLTASLVDPARKARARVLAREAAVVCGAPWVEATIRQLDPEARITWLCA
EGERCAADQTVLEIEGTARALLTAERTSLNFLQLLSAVATKTALYADAVEGTRARIVDTRKTLPGLRLAQKYAVRTGGGL
NHRIGLYDAVLIKENHIVAAGGVAAALRSVAPGASQADFVEVEVETLAQLREALGAGARMVLLDNMDLPTLREAVRINDE
AGADRKAVLEISGGVTLEGLRALAETGVDRISVGALTKDVKAIDFSMRFQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nadC YP_281534.1 nicotinate-nucleotide pyrophosphorylase Not tested Not named Protein 5e-33 45