Gene Information

Name : Varpa_4728 (Varpa_4728)
Accession : YP_004157001.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG3638
EC number : -
Position : 5152497 - 5153309 bp
Length : 813 bp
Strand : +
Note : KEGG: reh:H16_B0293 ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGAGCTTCTTCCTCGATGCCATCGGCGTAGTCCACCCCAACGGCCAGCGCGCGCTGGCCGGGGTGACGCTGGCTGCGCG
CGATGGCGAACGCATCGCCGTCATCGGACCTTCGGGCGCGGGCAAGACGACGCTGCTGCGTGTGCTCGGCGCTGCATTGC
GCCCCGTTGAAGGCGAGGTGCAGGCGCTCGGTGCGAAGCCTTGGCAACTGCCCGCCGGCGCGCTGAAAAAGCTGCGCGCA
CGCATCGGTACCGTGCACCAGGCGCCGCCGATCGCGCCGCGGCTGCGCGTGGTCACCGCGGTGCTCGCGGGCCGGCTCGG
CGAGTGGTCTGTGCTGCGCGCGCTGGGGTCGCTCTTCCATCCTTCCGATATCGCGGGCGCGCACGAAGTGCTGTCGCGCC
TCTCGCTCGAAGATCGCCTCTTCGACCGCTGCGACCGCCTCTCGGGCGGGCAGCTGCAGCGCGTGGGCATCGCACGCGTG
CTCTACCAGCGGCCGGCCCTGCTGTTGGCCGACGAGCCCGTCTCCGCGCTCGACCCGACGCTCGCCGACGCCGCCATCGG
CCAGCTCGTCGCGCAGAGCGAATCCACGGGCGCCACGCTGGTCGCCTCGCTGCATGCGGTGGACCTCGCGCTGCGCTGGT
TTCCGCGCGTCGTCGGCATGCGCAACGGGCAGGTGATGTTCGACCTGCCGACCGCCGAGGTCACGCCCGCGATGCTCGAT
GCGCTCTATGCGAGCGAAGGCGGCGTGGCGGCGCAGCGGGCGCCGCAGCCCGTCGCTGCCGAGATGGCCTTCCAGCGGCC
GGACTGCCCGTGA

Protein sequence :
MSFFLDAIGVVHPNGQRALAGVTLAARDGERIAVIGPSGAGKTTLLRVLGAALRPVEGEVQALGAKPWQLPAGALKKLRA
RIGTVHQAPPIAPRLRVVTAVLAGRLGEWSVLRALGSLFHPSDIAGAHEVLSRLSLEDRLFDRCDRLSGGQLQRVGIARV
LYQRPALLLADEPVSALDPTLADAAIGQLVAQSESTGATLVASLHAVDLALRWFPRVVGMRNGQVMFDLPTAEVTPAMLD
ALYASEGGVAAQRAPQPVAAEMAFQRPDCP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 4e-30 41