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Name : Varpa_4695 (Varpa_4695) Accession : YP_004156969.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Virulence Product : DNA repair protein radc Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 5118320 - 5118997 bp Length : 678 bp Strand : + Note : KEGG: vap:Vapar_4033 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC DNA sequence : ATGGCTTTCAAGGATCTCCCTGTCGACGCTCGCCCGCGCGAAAAGCTCATCGCACGGGGCGTCACTGCGCTGGCCGACGC CGAGCTTCTGGCGCTGCTGCTGCGCACCGGCGTCGCGGGCAAGAACGTGCTGCAGATGGCGCAGGAACTGCTCGAACGCT TCGGCGGCCTCTCGGGTCTCTTGCACACCGGTCCCGAGGAACTGAAGCTCGTCAAGGGCATGGGCGGCGATGCCAAGCGC GCCGAGCTGATCGCGGTGCTCGAACTGGCCCGCCGCGCCATGGCCGAGCAACTCAAGGAGCGCACGGTGTTCGACTCGCC CGACGCGGTCAAGCAGTACGTGCAATTGCACATCGGCTCACGGCCGCACGAGGTGTTCGCGGTGCTGTTCCTCGACGCGC AGCACCGGCTGATCGTGCTGGAAGAACTGTTTCGCGGAACGCTCACGCAGGCGAGCGTCTATCCGCGAGAAATCGTCATG CGTGCGCTGCACCACCAGGCCGCGGCCGTGGTGCTGGCGCACAACCACCCGAGCGGCAGCATCGAGCCTTCGCGCGCCGA CGAATCGCTCACGCAAACGCTCAGGGCCGCGCTCTCGCTGGTGGATGTGCGCGTGATCGACCATGTCATCGTGAGCCCGG GACAGAGCTTCTCGATGGCCGAAAAAGGAGTGCTCTGA Protein sequence : MAFKDLPVDARPREKLIARGVTALADAELLALLLRTGVAGKNVLQMAQELLERFGGLSGLLHTGPEELKLVKGMGGDAKR AELIAVLELARRAMAEQLKERTVFDSPDAVKQYVQLHIGSRPHEVFAVLFLDAQHRLIVLEELFRGTLTQASVYPREIVM RALHHQAAAVVLAHNHPSGSIEPSRADESLTQTLRAALSLVDVRVIDHVIVSPGQSFSMAEKGVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42098.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-18 | 43 |
| unnamed | AAL08475.1 | unknown | Not tested | SRL | Protein | 3e-18 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_4695 | YP_004156969.1 | DNA repair protein radc | VFG1617 | Protein | 1e-18 | 43 |
| Varpa_4695 | YP_004156969.1 | DNA repair protein radc | VFG1066 | Protein | 2e-18 | 43 |
