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Name : Varpa_4691 (Varpa_4691) Accession : YP_004156965.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 5114458 - 5115789 bp Length : 1332 bp Strand : - Note : TIGRFAM: seryl-tRNA synthetase; KEGG: vap:Vapar_4028 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); SeryL-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGACATCACCCTGCTCCGAAAAGACCTGGCCTCCGCTGTGGCCGGCCTCGAAAAACGCAAGAAGAACCAGCCCTA CCTCGATGTGTCGGCGTTCACCGCGCTCGAAGCCGAGCGCAAGACCGTCCAGACCCGCACTGAGGAAATCCAGGCGCGCC GCAACGCCCTGAACAAGCAGATCGGCCCGCTCAAGGCCAAGGGCGAATCGACCGATGCGCTGATGGCCGAAGTCAACGCA CTCAAGGCCGAGCAGGAATCGCAGTCCAAGCGCCTCGACGAGATCCAGCCCGAACTGCAGGCCTTGCTGCTCGCGGTGCC CAACCTGCCGCACGCCAGCGTGCCGGTCGGCGAGGACGAGACCGGCAACGTCGAAGTGCGCCGCTGGAGTCCGCAAGGCG GTGCCGGCGCCAATGCCACGCCGCTGGGCTTCGCCGCGAAGGATCACGTGGACCTCGGCGCACCGCTGGGCCTCGACTTC GAGATGGGCGCCAAGCTCGCCGGCTCGCGCTTCACCGTCATGAAGGGGCCGATCGCCCGCCTGCACCGCGCGCTCGCGCA GTTCATGCTCGACACCCAGACCGAGAAGCACGGCTATGCCGAGTGCTACGTGCCCTACATCGTCAACGCCGCCACGTTGA GCGGCACCGGCCAGTTGCCCAAGTTCGAAGGCGACCTCTTCGCCGCGAAGAAGGGCGGCCAGGACGGCGAGCCCGCGCCC GACCATTCGGCGCTGTACCTGATCCCGACCAGCGAAGTGCCGCTGACCAACTTCGTGCGCGACGAGGTGGTGGCCGAGTC GCAATTGCCGATCAAGCTCACGGCGCACACGCCGTGCTTCCGTTCGGAAGCCGGCAGCGCGGGGCGCGACACGCGCGGCA TGATCCGCCAGCACCAATTCGACAAGGTCGAGATGGTGCAGATCGTTCATCCCGAAAAGAGCTACGACGCGCTGGAGCAG ATGACCGGCCATGCCGAGGCCGTGCTGCAGGCGCTCGAACTGCCGTACCGCGTGGTGCTGCTGTGCACCGGCGACATGGG CTTCGGCGCGACCAAGACCTACGACCTGGAGGTCTGGCTGCCGGCGCAGGACACCTACCGCGAGATCAGCTCGGTCTCGA ACTGCGAAGCCTTCCAGGCGCGTCGCCTGCAAGCTCGCTTCAAGAACGCACAAGGCAAGAACGAACTCGTGCACACGCTG AACGGCTCTGGCCTGGCGGTGGGACGCGCGCTGGTGGCGGTGCTTGAAAACCACCAGAACGAGGATGGTTCGATCAACGT GCCCGTCGCGCTGCGGCCATACCTCGGCGGACTGGAACTGTTGCGCGGTTGA Protein sequence : MLDITLLRKDLASAVAGLEKRKKNQPYLDVSAFTALEAERKTVQTRTEEIQARRNALNKQIGPLKAKGESTDALMAEVNA LKAEQESQSKRLDEIQPELQALLLAVPNLPHASVPVGEDETGNVEVRRWSPQGGAGANATPLGFAAKDHVDLGAPLGLDF EMGAKLAGSRFTVMKGPIARLHRALAQFMLDTQTEKHGYAECYVPYIVNAATLSGTGQLPKFEGDLFAAKKGGQDGEPAP DHSALYLIPTSEVPLTNFVRDEVVAESQLPIKLTAHTPCFRSEAGSAGRDTRGMIRQHQFDKVEMVQIVHPEKSYDALEQ MTGHAEAVLQALELPYRVVLLCTGDMGFGATKTYDLEVWLPAQDTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTL NGSGLAVGRALVAVLENHQNEDGSINVPVALRPYLGGLELLRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-98 | 50 |
