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Name : Varpa_4311 (Varpa_4311) Accession : YP_004156591.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4638271 - 4639575 bp Length : 1305 bp Strand : - Note : PFAM: major facilitator superfamily MFS_1; KEGG: rpf:Rpic12D_2163 major facilitator superfamily MFS_1 DNA sequence : ATGACCCAGCCCTACGAGGGGCGCTTCGACAGCAGCTCCGACGCGGTCTACCGTAAGGTCAGCTGGCGCCTGATTCCGCT GCTCTTCCTCTGCTACATCGTGGCCTACCTGGACCGCGTGAACGTCGGCTTCGCCAAGCTGCAGATGCAGGGCGACCTGC AGTTCAGCGAGGCGGTGTATGGCCTGGGCGCTGGCATCTTCTTCGTCGGCTATTTCCTCTTCGAGGTGCCGAGCAACGTG GTGCTGCACCGCGTGGGCGCGCGCCGCTGGATCGCGCGGATCATGGTCACCTGGGGGCTGCTGTCGGCGGCGACCATGTT CGTGAGTTCGCCGATGTCGTTCTACGTGATCCGCTTTTTGCTCGGCGCGGCCGAGGCGGGCTTCTTCCCCGGAATCATCC TGTACCTCACCTACTGGTACCCCGCCGCGCGGCGCGGCAAGGCGACCTCGCTCTTTCTCGCGGCGATTCCGTTCGCGGGC ATCCTGGGCGGGCCGATCTCGGGCTGGATCTTGCAGGGCATGAGCGGCGTGCATGGCTGGGCCGGATGGCAGTGGCTCTT CCTGCTGCAAGGCCTGCCGACCGTGGCGCTGGGCGTGGTCGTGTGGCGCTACCTCGACGACCGCGTGAAAGACGCGCAAT GGCTCATACCGGCCGAGCGCGAGCTCATCGCACGCGACATCGCGGCGGAAGACGCTGGCAAGTCCGAAGCGAAGATCCTC ACCGTGCTCGCCAACCCCCGCGTGTGGCTCTTGGCGCTGGTGTACTTCTCGTTCGTCTCGGGGCTCTACGGCATCTCGTT CTGGCTGCCGAGCATCATCAAGGCGATCGGCGTGAAGGGCGCGCTCGATATCGGCCTCGTCAGCGCGATTCCCTGGGCCT TCGGCGTTGTCGCGATGTACCTGGTGGCGCGCAGCGCCGACCGCCGGCTCGAGTACCGCTGGCACAGCGCCATCGCGGCC GTAGTCGGCGCCGTCGGACTGGTGCTGAGCGTGGCCTTCCATGGCAACGCCGTGTATGCGATGGCCGGGCTCACGCTCGC CACGATGGGGATCATGGCCACGCTGCCTATCTTCTGGGGCATGCCGACCGCGTTCCTCGGCGGTGCGGCGGCCGCGGCGG GCATTGCCTTCATCAACTCGTTCGGCAACCTCTCGGGCTTCAGCGCGCCTTTCATGATCGGCTTGATCAAGGACGCGACC CAGAGCACCGACGCGGGCCTCCACATGCTGGCCGCGCTGCTCGTCATCGGCGCGGTGCTCGTGCTCTTCGTCAAGCCACA AGCCGCTTCTTCGAAGAAGCGCTGA Protein sequence : MTQPYEGRFDSSSDAVYRKVSWRLIPLLFLCYIVAYLDRVNVGFAKLQMQGDLQFSEAVYGLGAGIFFVGYFLFEVPSNV VLHRVGARRWIARIMVTWGLLSAATMFVSSPMSFYVIRFLLGAAEAGFFPGIILYLTYWYPAARRGKATSLFLAAIPFAG ILGGPISGWILQGMSGVHGWAGWQWLFLLQGLPTVALGVVVWRYLDDRVKDAQWLIPAERELIARDIAAEDAGKSEAKIL TVLANPRVWLLALVYFSFVSGLYGISFWLPSIIKAIGVKGALDIGLVSAIPWAFGVVAMYLVARSADRRLEYRWHSAIAA VVGAVGLVLSVAFHGNAVYAMAGLTLATMGIMATLPIFWGMPTAFLGGAAAAAGIAFINSFGNLSGFSAPFMIGLIKDAT QSTDAGLHMLAALLVIGAVLVLFVKPQAASSKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-92 | 51 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-92 | 51 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-92 | 51 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-92 | 51 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-94 | 51 |
