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Name : Varpa_4232 (Varpa_4232) Accession : YP_004156513.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4558677 - 4560011 bp Length : 1335 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM2545 major facilitator superfamily protein DNA sequence : ATGAACACCGCCACCCTCGATGCCACCGATGCGCGCACGCCCGCCTCGGCCGATGCGCACGACGACGCCGCGCTTTTCCG CAAGATCACCTGGCGGCTGATGCCGCTGCTGTGCGCCTGCTATGTGCTGAACTACCTGGACCGCACCAACGTCGGCTATG CGCAGTTGCAGATGAAGGACCAGCTGGGCTTCAGCGACGCGGTGTTCGGCCTGGGGGCCGGCATCTTCTTCATCGGCTAT GCGGTGTTCGAGATTCCGAGCAACCTGATGCTCGCGAAGATTGGCGTGCGTGCGACGCTGCTGCGCATCATGGGCCTGTG GGGTCTGGCCTCGGCGGCGATGATGTTCGCGACGACGCCGATGCAGTTCTATGTGCTGCGCTTTCTGATCGGCGTGTTCG AGGCGGGCTTTGCGCCCGGCGTGCTGTTCTACCTGACGCTGTGGTTTCCCTCGCACCGCCGCGCGCAGGCGACTGCGCTC TTCTTCATGGCCTTCGGGGCAGCGCCGATCGTCGCGGGGCCTATCGCCGGGCTCACGATGACCTACCTCGACGGGGTGCT CGCGCTGCGTGGCTGGCAGTGGCTGTTTCTGCTCGAAGGGCTGCCGAGCGTGCTGCTGGGCATTGCGGCCTTCCGCTGGC TCTCGAACAGCCCGGCGCAGGCGCCATGGCTCACCGCCACCGAGAAGCAGCGCGTGGCGCGTCTGCTGGCCGAGGACCAG GCCGCGCACGGTGCCGCCGAGCGGCACACCTTCGGTGCGGCCATGCGCGACGGGCGCGTCTGGCTGATCGGCTTCATGTC GTTCCTGATCATCCTGGGCATCTATGCGCTGTCGTTCTGGCAGCCGACCATCCTGAAATCGATGGGGCTGAGCGTGCTGC AGATCGGCTTCTATTCGGTCATTCCGGCGGTCGCGGGCATCGCGGCCAACATCGTGGTCGGGCGGCATTCCGACCGGAAG AAGGAACGGCGCTGGCACTTCGCCATCGGTGCGCTGGTGGGTGCGGCGGGCCTCGCGCTGACCACGCTCTTCATGCAGAG CCCGTTCGCGGCCGTGCTGTGCCTGGCGCTGGCGTCGATGGGCATCTCGAGCGCGTTCACCGTGCTGTGGGCCATTCCGG GCAACTTCATGTCCAGGAGCGCGGCGGCCGCGGGCATTGCGCTCATCAGCACCATCGGCGGCAGCGCGGGGCTGGTCGCA CCGATGATGGTCGGCGCGCTCAAGACACTGACGGGCGGCTTCACGGCCAGCCTTTATGTGCTGAGCGGAGCACTGGTGCT GTCGGCGCTGTTGATGTTGCTGGCCCTGCCCGCGAGCGCCGTGGCCAAACGGTAG Protein sequence : MNTATLDATDARTPASADAHDDAALFRKITWRLMPLLCACYVLNYLDRTNVGYAQLQMKDQLGFSDAVFGLGAGIFFIGY AVFEIPSNLMLAKIGVRATLLRIMGLWGLASAAMMFATTPMQFYVLRFLIGVFEAGFAPGVLFYLTLWFPSHRRAQATAL FFMAFGAAPIVAGPIAGLTMTYLDGVLALRGWQWLFLLEGLPSVLLGIAAFRWLSNSPAQAPWLTATEKQRVARLLAEDQ AAHGAAERHTFGAAMRDGRVWLIGFMSFLIILGIYALSFWQPTILKSMGLSVLQIGFYSVIPAVAGIAANIVVGRHSDRK KERRWHFAIGALVGAAGLALTTLFMQSPFAAVLCLALASMGISSAFTVLWAIPGNFMSRSAAAAGIALISTIGGSAGLVA PMMVGALKTLTGGFTASLYVLSGALVLSALLMLLALPASAVAKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-63 | 43 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-63 | 43 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-63 | 43 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-63 | 43 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-66 | 43 |
