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Name : Varpa_4050 (Varpa_4050) Accession : YP_004156333.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 4372348 - 4373373 bp Length : 1026 bp Strand : + Note : KEGG: vap:Vapar_3533 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase DNA sequence : ATGAACGCCGTCGCCCCGCTCCCGCCCGCCGCGGTCGAGATCGTCGCGCTCAGCAAGCGCTACGCCCCCGGCACGCCGGC CGCCGTCGACGCCATCGATCTGCGCATCGCCAGCGGCAGTTATTGCTGCCTGCTGGGGCCCTCAGGCTGCGGCAAGAGCA CCACGCTGCGCATGATCGCGGGGCATGAATCGGTCACCAGCGGCGACATCCTCCTGGACAACCGCAACATCACCAACCTG CCCGCCGCCGCGCGCGGCACGGCGATGATGTTCCAGAGCTTCGCGCTGTTCCCGCACCTCTCGGCCACCGACAACGTGGC TTTCAGCCTCAAGATGAAAGGCGTCGGCAAGGCCGAGCGCCAGAAGCGTGCGCGCGACCTGCTGGCGCGCGTCGCGATGG GCCACTTGGCCGAGCGCAAGCCGGGCGAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCGCTGGCGCGCGCGCTCATCACC GAGCCGCGCGTGCTGCTGCTCGATGAACCGCTGTCGGCGCTGGACCCGTTCCTGCGCATCCAGATGCGCGCCGAACTGCG GCGCTGGCAGAAGGAACTGGGCCTGACCTTCGTGCACGTGACGCACTCGCAGGAAGAAGCCATGGCGCTGGCCGACACGA TGGTGGTGATGAACCACGGCGTGATCGAGCAGGTCGGCTCGCCGCACGAGATCTACAACCACCCCGCCAACGAATTCGTG GCGCGCTTCATGGGCGGCCACAACGTGATCGACACGCTCGCCGGGCCGATTGCGGTGCGCAACGACCACATGCGGATCGC CGCGAACTCGCAGGCCGATGGCCTGGCCGCCGCGATCACCGACGTCGAATACCAGGGCACCTACGTGCTGCTCGGCCTGG TGTTGGAAGCCGCCGCGCCGGAGCGCCGCAACGTGTCGGTGCTGCTGGGCGAAGCCGCCTTTCTCGCGAGCCCCTACGCG CAAGGCGAGACGGTTCGCCTGTCGTGGGCCGAAGCCGACGCGCGCGCGCTCGCCGTGGCGCCGTAG Protein sequence : MNAVAPLPPAAVEIVALSKRYAPGTPAAVDAIDLRIASGSYCCLLGPSGCGKSTTLRMIAGHESVTSGDILLDNRNITNL PAAARGTAMMFQSFALFPHLSATDNVAFSLKMKGVGKAERQKRARDLLARVAMGHLAERKPGELSGGQQQRVALARALIT EPRVLLLDEPLSALDPFLRIQMRAELRRWQKELGLTFVHVTHSQEEAMALADTMVVMNHGVIEQVGSPHEIYNHPANEFV ARFMGGHNVIDTLAGPIAVRNDHMRIAANSQADGLAAAITDVEYQGTYVLLGLVLEAAAPERRNVSVLLGEAAFLASPYA QGETVRLSWAEADARALAVAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-34 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Varpa_4050 | YP_004156333.1 | ABC transporter | BAC0604 | Protein | 1e-47 | 44 |
