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Name : Varpa_4039 (Varpa_4039) Accession : YP_004156322.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : nitrate ABC transporter ATPases c and d Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 4357372 - 4358181 bp Length : 810 bp Strand : + Note : TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: vap:Vapar_3524 nitrate ABC transporter, ATPase subunits C and D; SMART: AAA ATPase DNA sequence : ATGAACGACGACAGCAAGTACATCGAGATCCGCGACGTCGAGCAGCGCTTCAAGACGGCCAAGGGGAGCTTTCTCGCACT GCGCGATATCAACCTGAACGTTGCGAAGGGCGAGTTCATCACGCTCATCGGGCACTCAGGCTGCGGCAAGTCGACGCTCT TGAACCTGATCGCCGGGCTGACGACGCCGACGCAAGGCGTGCTGCTGTGCGCGAACCGCGAAATCAAAGGGCCTGGCCCT GAACGCGCCGTCGTGTTCCAGAACCACTCGCTGCTGCCCTGGCTCACCTGCTTCGAGAACGTGTACCTCGCGGTCGAGCG CGTGTTCGCCGCCACCGAGAGCAAGGCGCAACTGCGCCAGCGCACCGACGCGGCGCTCGCGCTGGTCGGCCTCACGCCCG CCGCGCAGAAGCGGCCCGGTGAAATCTCCGGCGGCATGAAGCAGCGGGTGGGCATCGCGCGCGCGCTGTCGATGGAACCC AAGGTGCTGCTGATGGACGAGCCCTTCGGCGCGCTCGACGCCCTCACCCGCGCCAAGCTGCAGGACGAACTGCTCGCCAT CGTGCAGAAGACACACAGCACCGTCGTCATGGTCACGCACGACGTCGACGAGGCCGTGCTGCTGAGCGACCGCATCGTGA TGCTCACCAACGGTCCGGCCGCCACCATCGGCGACGTGCTGGCGGTGGACATCGCGCGCCCGCGCAACCGTGTCGAGCTG GCCGAAGACCCGGCCTATGTGCATGCGCGCAAGGCGGTGATCGATTTCCTCTACACGCGCCAGGCGCATGTGGAGAAGGT CGCGGCCTGA Protein sequence : MNDDSKYIEIRDVEQRFKTAKGSFLALRDINLNVAKGEFITLIGHSGCGKSTLLNLIAGLTTPTQGVLLCANREIKGPGP ERAVVFQNHSLLPWLTCFENVYLAVERVFAATESKAQLRQRTDAALALVGLTPAAQKRPGEISGGMKQRVGIARALSMEP KVLLMDEPFGALDALTRAKLQDELLAIVQKTHSTVVMVTHDVDEAVLLSDRIVMLTNGPAATIGDVLAVDIARPRNRVEL AEDPAYVHARKAVIDFLYTRQAHVEKVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 4e-41 | 43 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 8e-32 | 42 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-30 | 42 |
