Gene Information

Name : Varpa_3968 (Varpa_3968)
Accession : YP_004156251.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Resistance
Product : arsenate reductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1393
EC number : -
Position : 4279154 - 4279534 bp
Length : 381 bp
Strand : +
Note : KEGG: vap:Vapar_1852 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related

DNA sequence : 
ATGACCGCACGCACCCCCACCACCGACTACCCGATGACGATCTATCACAAGCCCAACTGCAGCACGTCGCGCAACGTGCT
GGGCTTGATCCGCGAAAGCGGCGTGGAACCGACGATCGTCCTGTACCTGGAAACGCCGCCTTCGAAGACGAAGCTGCGCG
AACTCACGAAGGCCATGGGCATGACCGCGCGCGATCTGCTGCGCACGAAGGAAGCGCCGTACGAAGAACTGAAGCTGGCC
GATCCGAAGTGGAGTGACGACCGACTGTTCGATGCGATCGTGGAGAACCCGATCCTTTTGCAGCGCCCGATCGTGGTCTC
GCCGCGCGGCACGCTGATGTGCCGGCCGTGGGAGCGCGTGCGCGAGATCCTGCCTGCTTGA

Protein sequence : 
MTARTPTTDYPMTIYHKPNCSTSRNVLGLIRESGVEPTIVLYLETPPSKTKLRELTKAMGMTARDLLRTKEAPYEELKLA
DPKWSDDRLFDAIVENPILLQRPIVVSPRGTLMCRPWERVREILPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC2 YP_001007634.1 arsenate reductase Not tested YAPI Protein 1e-28 55
arsC ADZ05768.1 arsenate reductase Not tested AbaR11 Protein 4e-24 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Varpa_3968 YP_004156251.1 arsenate reductase BAC0583 Protein 1e-31 57
Varpa_3968 YP_004156251.1 arsenate reductase BAC0585 Protein 2e-29 55
Varpa_3968 YP_004156251.1 arsenate reductase BAC0582 Protein 2e-30 55
Varpa_3968 YP_004156251.1 arsenate reductase BAC0584 Protein 1e-29 54