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Name : Varpa_3960 (Varpa_3960) Accession : YP_004156243.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 4270868 - 4271647 bp Length : 780 bp Strand : + Note : KEGG: vap:Vapar_1860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase DNA sequence : ATGTCCCAAGTCAACCTGATCGAAGCGCGCGGCGTCTCGAAGACCTATCAAAGCAAGGACGGCCCGGTCGAATCGCTCAA GCCGCTGGACTTCGCCATCGAGGAAGGCGAGTTCGTCTCCGTCGTCGGCCCGTCGGGCTGCGGCAAGAGCACGCTGCTGA AAATGGTGGCGGGCCTGCTGCCCATCAGCGGCGGTGAACTCACCCTGGCCGGCAAGCCGATCAGCGGGCCGCAGAAGGAC GTGGGCATCGTGTTCCAGAGCGCCGTGCTGCTGCCCTGGCGCAGCGTGGAAGACAACATCCTGCTGCAGGCCGAAATGCG CCACCTGCCCAAGGCGGCCTCGCAGGCCCGGGCGCGCGAGCTGATGGAGATGGCCGGCCTCAAGGGCTTCGAGGGCAAGT ACCCGTGGCAGCTCTCGGGTGGCATGCAGCAACGCGCGTCGATCTGCCGTGCGCTGCTGCACGACCCCTCGGTGCTGTTG ATGGACGAGCCCTTCGGCGCACTCGATGCAATGACGCGCGAGAAGATGAACCTCGAACTGCAGCGCATCTGGATGGCTTC GAAGAAGACCGTGATGCTCATCACCCACAGCATCCCCGAGGCGATCTTCCTGTCGGACCGCGTGATCGTGATGAGCGAGC GCCCCGGCTCGATCGCGGCCGTGTACGACATCGACCTGCCGCGCCCCCGCACGCTCGACATGATGGCCTCGCCCGAGTTC GGCCAGTACACGAAGCTGGTGCGCGCGCATTTCTTCTCGCAGGGCATCCTGGACCACTGA Protein sequence : MSQVNLIEARGVSKTYQSKDGPVESLKPLDFAIEEGEFVSVVGPSGCGKSTLLKMVAGLLPISGGELTLAGKPISGPQKD VGIVFQSAVLLPWRSVEDNILLQAEMRHLPKAASQARARELMEMAGLKGFEGKYPWQLSGGMQQRASICRALLHDPSVLL MDEPFGALDAMTREKMNLELQRIWMASKKTVMLITHSIPEAIFLSDRVIVMSERPGSIAAVYDIDLPRPRTLDMMASPEF GQYTKLVRAHFFSQGILDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 2e-39 | 44 |
