Gene Information

Name : Varpa_3873 (Varpa_3873)
Accession : YP_004156165.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : fumarylacetoacetate hydrolase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : -
Position : 4170249 - 4170950 bp
Length : 702 bp
Strand : +
Note : PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: vap:Vapar_2018 fumarylacetoacetate (FAA) hydrolase

DNA sequence :
ATGGCTTCCGAGTTTGTTTTCGCCCCGCCCGCCACCGTTTCGGTTCCCGTGGCCGGACAGCCCGCCCGCTTTCCGGTGCA
CCGCATCTACTGCGTGGGCCGCAACTACGAAGATCACGCCAAGGAAATGGGTTTCACCGGCCGCGAACCGCCCTTCTTCT
TCATGAAGCCCACAGACGCGCTGGTGGTGGTCGACGAAGGCCAGACCGGCACCATGGCCTACCCCTCGCTCACCAAGAAC
CTGCACCACGAGATCGAACTCGTCGTGGCCATCGGCACGGGCGGCAAGAACATCAAGGCCGCCGATGCGCACAAGCACAT
CTACGGCTACGCAGTCGGCCTCGACATGACGCGCCGCGACCTGCAGGGCGAGATGAAAAAGCAGGGCCGTCCCTGGGACA
TCGGCAAGGGCTTCGAGCAGAGCGCGCCCATCGGCCCGATCGTGCCGGTGGCCGCCGCCGGCGATGCCGAGAACGCAGAA
ATCTCGCTGCAGGTGAACGGCGTGGACCGCCAACGCAGCACCGTGAGCAAGCTGATCTGGAACGTGGCAGAAACCATCGA
GCACCTCTCGGCAGCCTGGGAGCTGCAGCCCGGCGACCTGATCTACAGCGGCACGCCCGAAGGCGTCGCGGCCGTGGTCT
CGGGCGACACGCTCGTGGGCAAGGTCGCCGGCCTGCCGACGCTCACCGTCAAGATCGCCTGA

Protein sequence :
MASEFVFAPPATVSVPVAGQPARFPVHRIYCVGRNYEDHAKEMGFTGREPPFFFMKPTDALVVVDEGQTGTMAYPSLTKN
LHHEIELVVAIGTGGKNIKAADAHKHIYGYAVGLDMTRRDLQGEMKKQGRPWDIGKGFEQSAPIGPIVPVAAAGDAENAE
ISLQVNGVDRQRSTVSKLIWNVAETIEHLSAAWELQPGDLIYSGTPEGVAAVVSGDTLVGKVAGLPTLTVKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 5e-60 58