Gene Information

Name : Varpa_0369 (Varpa_0369)
Accession : YP_004152702.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : fumarylacetoacetate (faa) hydrolase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : -
Position : 389736 - 390440 bp
Length : 705 bp
Strand : +
Note : PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: vap:Vapar_0354 fumarylacetoacetate (FAA) hydrolase

DNA sequence :
ATGTCCTTCGTCTTCACGCCTCCTTCCATCGTCGGCCTGCCCATCGTCGACTCCGACAAGCTATTCCCCGTGCGCCGCGT
CTACTGCGTCGGCCGCAACTACGCAGCACACGCCCGCGAGATGGGGTTCGACCCCGACCGCGAACCGCCGTTCTTCTTCT
GCAAGCCCAACGACGACGCCTCGGTCGTGCCGGTGGCTGAAGGCGAGACCGGCAAGATCCCGTACCCGCCGCTCACGAGC
AACTACCACTACGAGGCCGAGCTCGTGGTCGCCATCGGCAAGGGCGGCAAGGACATCCCGGTGGACCAGGCATCGAGCCA
CATTCACAGCTACGCCGTCGGCCTCGACATGACGCGCCGCGACCTGCAGATGAAGATGCGCGAAGCCGGCCGCCCTTGGG
AAATCGGCAAGGCCTTCGACTTCTCGGCGCCCATCGCGCCGCTGCGCACGCTCGCCGACGTGGGCGAGATCAACGCGGGC
GCGATCACGCTCACCGTCGATGGCGAGGTGCGCCAGAACAGCGACATCACGCACCTGATCTGGTCGGTCAACGAAGTGAT
CGCCAATCTCTCGACGCTCTTCACGCTGCAGCCCGGTGACCTGATCTTCACGGGCACGCCTGAAGGCGTGGGCGCGGTGA
AAGCGGGGCAGACGATCAAGGTGAGCATCGAGCGGCTGCCGTCGCTCACCGTTCGCATCGACTGA

Protein sequence :
MSFVFTPPSIVGLPIVDSDKLFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPNDDASVVPVAEGETGKIPYPPLTS
NYHYEAELVVAIGKGGKDIPVDQASSHIHSYAVGLDMTRRDLQMKMREAGRPWEIGKAFDFSAPIAPLRTLADVGEINAG
AITLTVDGEVRQNSDITHLIWSVNEVIANLSTLFTLQPGDLIFTGTPEGVGAVKAGQTIKVSIERLPSLTVRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 3e-74 67