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Name : Varpa_3641 (Varpa_3641) Accession : YP_004155936.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : AMP-dependent synthetase and ligase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : - Position : 3934718 - 3936370 bp Length : 1653 bp Strand : + Note : PFAM: AMP-dependent synthetase and ligase; KEGG: vap:Vapar_6221 AMP-dependent synthetase and ligase DNA sequence : ATGAGCGCGCCATCCTATGCACGGGGCCTCGAACGCTGCGCGGCGAATCATGTGCCGCTCACGCCGCTGGGCTTTCTCGA CCGCGCCGCCCTGGCACATCCGAACCGCGTGGCGGTGGTGCACGGCGATCTCTCGCGAACCTGGGCCGAGACGCGGGAGC GCTGCCATCGCCTGGCGTCGGCGCTGATGATGCGCGGCATCGAGGCGGGTGACACCGTGTCGGTGCTCGCGCCCAACACG CCCGCCATGCTGGAGGCCCACTTCGGCATTCCGCTGGCGGGCGCGGTGCTCAACGCGATCAACCATCGGCTGGATGCCGA AGGCATCGCGTTCATCCTGCGCCACGGCGAGTGCAAGTTGCTGCTGGTCGACCGCGAATTCGCCGCCACGGTGGCCGCGG CCCTGAAGCTTCTGGACCACGCACCTGCGGTCATCGACATCAACGATCACCTCGCACCACCGGGCGAACCCATCGGCGAG ACGGACTACGAATCCTTGCTGGCGAACGGAGACCCGGAATTTGCCGGCCGGTGGCCCGGCGACGAGTGGCAACCCATCGC CCTTAACTACACCTCCGGCACCACCGGAGACCCCAAGGGCGTAGTCGCCAGCCACCGCGGCACCTACCTCATGAGCCTGC TGCAGATCACGAACTGGGCGATGCCCCGGGCGCCGAAGTATCTGTGGACCCTGCCCATGTTCCACGCGAACGGCTGGTGC TTCACCTGGGCCGTGACCGCGTCCGCGGGCACCCATGTCTGCCTGCGCCGGGTGTCCGCCGAGGCGGTGCTGGAGGCCAT CGACCGGCACGAGATCGATCACCTCTGCGCAGCGCCCGTCGTGATGGCGATGCTCGCGGACGCGGCCAAAGACACCCGGC TGCCGCGCCCCGTACGCGTGCTGACTGCCGGCTCGCCGCCGCCGCTCGCCGTGCTGAATGCGGTGCTGGCGATGGGCTTC GACGTGGAGCACGTCTTCGGCATCACGGAGGTTTCGGGCACGCCGGTGAGTTGCGCGTGGCAGGACGGCTGGGACGATCT TGCGCCCGCCGAGCAGGGCGCGCTGCGGGTGCGCCAGGGCGTGCGCGCCGCCATGTTCGAGGGCCTCATGGTCGGCGATG CAGACACCCTCGAGCCCGTCGTGCCCGACGGCAAATCGGCGGGCGAGCTCATGCTGCGCGGCAACACCGTGATGATGGGT TACTTCAAGAACGAGGCCGCAACGCGCAAGGCGCTCGCCGACGGCTGGTTCCGCACCGGCGACGTCGCGGTTTTGCATGC CAACGGGTATGCGCAGATCACCGACCGTTCGAAGGACGTGATCATCTCGGGCGGCGAGAACATCTCCTCGGTCGAGATCG AGGACGTCGTCCATGGACACCCGGCGGTGCTGCATGCGGCCGTGGTGGCCCAACCCGACGAGAAATGGGGCGAGGTGCCC TGCGTGTTCATCGAACTCAAGACCGGTGTCGCCGCGCCCACCGAGCAGGAGATCATTTCGTTCTGCCGGGAGCGGCTGGC GCACTTCAAGTGTCCGCGCCGGGTGATCTTCACCCCGTTGCCGAAGACGGCCACGGGAAAGATCCAGAAGTTCCGCTTGC GCGAGCAGGCCGGCAGCCAGGACGCCATCACCCGGCTCGCGAGCCATGGCTGA Protein sequence : MSAPSYARGLERCAANHVPLTPLGFLDRAALAHPNRVAVVHGDLSRTWAETRERCHRLASALMMRGIEAGDTVSVLAPNT PAMLEAHFGIPLAGAVLNAINHRLDAEGIAFILRHGECKLLLVDREFAATVAAALKLLDHAPAVIDINDHLAPPGEPIGE TDYESLLANGDPEFAGRWPGDEWQPIALNYTSGTTGDPKGVVASHRGTYLMSLLQITNWAMPRAPKYLWTLPMFHANGWC FTWAVTASAGTHVCLRRVSAEAVLEAIDRHEIDHLCAAPVVMAMLADAAKDTRLPRPVRVLTAGSPPPLAVLNAVLAMGF DVEHVFGITEVSGTPVSCAWQDGWDDLAPAEQGALRVRQGVRAAMFEGLMVGDADTLEPVVPDGKSAGELMLRGNTVMMG YFKNEAATRKALADGWFRTGDVAVLHANGYAQITDRSKDVIISGGENISSVEIEDVVHGHPAVLHAAVVAQPDEKWGEVP CVFIELKTGVAAPTEQEIISFCRERLAHFKCPRRVIFTPLPKTATGKIQKFRLREQAGSQDAITRLASHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 3e-125 | 53 |
