Gene Information

Name : Varpa_3549 (Varpa_3549)
Accession : YP_004155844.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : glutamate--tRNA ligase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0008
EC number : 6.1.1.17
Position : 3835445 - 3836356 bp
Length : 912 bp
Strand : +
Note : KEGG: vap:Vapar_3126 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyL-tRNA synthetase, class Ic, catalytic domain

DNA sequence : 
ATGCGTGAGACCGGCCGTTTCGCGCCCTCGCCCACCGGGCCGCTGCACGCCGGCTCGCTGGTGGCCGCACTCGCAAGCTG
GCTCGACGTGCGTGCGCGCGGCGCAGAGGCGCGCTGGCTGATCCGCATCGAAGACGCCGATACCGAGCGCTGCCTGCCCG
GCATGGGCGAGCACATGCTGCGGCAGCTCGCCGATTGCCATCTGCTGCCCGACGAAACGCCCGTGTGGCAGACGCAGCGC
ACGGCGCTCTACGAGGCGGCGCTGCAGCGGTTGCAGGCCCTCGGCCTTGCCTACCCCTGCGGCTGTTCGCGCAAGGACAT
CGACACCGCGCTCGCCCGGCTCGGCCAGCGGCACGAACGGCATGGCGAGCGCGTGTACCCCGGCACCTGCCGCGACGGCC
TGCACGGCAAGCCCGCGCGGGCCTGGCGCTTTGCCACTGAAAAGTTCGTATCGACACAGCCGGGCGAACTGCGCTGGAGC
GACCGGCGCCTGGGCACGCAGCGCCAGGACGTCAGCCGCGAGGTCGGCGACTTCGTGCTGCGCCGCGCCGATGGCCCCTG
GGCCTATCAACTCGCCGTGGTTGTCGACGACGCGGAGCAAGGCGTGACCGACGTGGTGCGCGGCGAGGACCTGGCCGACA
ACACCGCGCGCCAGATCCTGCTGCAGCGCGCGCTCGGCCTGCCGACCCCGAGCTATCTGCACACGCCGCTGGTGCGCGGC
GCCGATGGCGACAAGCTGTCCAAGCAGAACGGCGCAACGCCCATCGACACCGCCACACCCGAAGCGGCATTGGCCGCGCT
CGGCACGGCCGCGCGCGTGCTCGGCCTCGGTCCCGCGACAGCCACATCCTGTGCGGCTGCGTTGGCCGGCTGGGTGCCCG
AATGGCGCGCTCTCTACAATTCGCGGCCGTAA

Protein sequence : 
MRETGRFAPSPTGPLHAGSLVAALASWLDVRARGAEARWLIRIEDADTERCLPGMGEHMLRQLADCHLLPDETPVWQTQR
TALYEAALQRLQALGLAYPCGCSRKDIDTALARLGQRHERHGERVYPGTCRDGLHGKPARAWRFATEKFVSTQPGELRWS
DRRLGTQRQDVSREVGDFVLRRADGPWAYQLAVVVDDAEQGVTDVVRGEDLADNTARQILLQRALGLPTPSYLHTPLVRG
ADGDKLSKQNGATPIDTATPEAALAALGTAARVLGLGPATATSCAAALAGWVPEWRALYNSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00313 YP_008207778.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR25 Protein 1e-38 45
BJAB0868_00317 YP_008211643.1 Glutamyl- and glutaminyl-tRNA synthetase Not tested AbaR26 Protein 1e-38 45