Gene Information

Name : Varpa_3515 (Varpa_3515)
Accession : YP_004155810.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : ATP-cone domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1327
EC number : -
Position : 3796498 - 3796941 bp
Length : 444 bp
Strand : +
Note : PFAM: ATP-cone domain protein; KEGG: vap:Vapar_3101 ATP-cone domain protein

DNA sequence :
ATGAAATGCCCTTTTTGCGGTCATCTTGAAACGCAGGTCGTGGAGACCCGCGTTTCGGAAGACGCCGACTTTGTCCGCAG
GCGCCGCCAGTGCAGCGCCTGCGACAAGCGCTTCACCACCTACGAGCGCCCCGACGTCAACTTCCCCGTGGTCGTGAAGA
AGGACGGCAGCCGCGCCGACTTCGACTCCTCCAAGGTACGTGCCTCGATGATGCTGGCGCTGCGCAAGCGTCCGGTGAGC
ATCGAGCAGATCGACACCGCCCTCTTGCGGATCGAGCAGAAGCTTTTGGCCAGCGGCCTGCGCGAAATCGATTCGACGAA
AGTCGGCGAACTGGTGATGCGCGAACTCAAGCGCCTCGACAAGGTCGCCTACGTTCGCTTTGCCTCGGTGTACCGCAGCT
TCGAGGACGTGGACGAATTCCGGCAGTTGCTGCGGGACATCTGA

Protein sequence :
MKCPFCGHLETQVVETRVSEDADFVRRRRQCSACDKRFTTYERPDVNFPVVVKKDGSRADFDSSKVRASMMLALRKRPVS
IEQIDTALLRIEQKLLASGLREIDSTKVGELVMRELKRLDKVAYVRFASVYRSFEDVDEFRQLLRDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00288 YP_008207753.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR25 Protein 5e-31 45
BJAB0868_00292 YP_008211618.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR26 Protein 5e-31 45