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Name : Varpa_3471 (Varpa_3471) Accession : YP_004155767.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3740905 - 3742554 bp Length : 1650 bp Strand : + Note : KEGG: reh:H16_A2085 ABC transporter ATPase; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase DNA sequence : ATGGCACGCACGTCTTTTTCCACCACCCCGCCCGCCGCCGGATCGCCCTGCCTTGTCGTGCGCGACCTGTGCATCGACTT GCCCCAAGGTGCGGACCGGCCGCATGCCGTCAGCGGTGTTTCCTTCGACGTGATGCCCGGCCAGGTCGTGTGCCTGCTGG GCGAATCGGGCTCTGGCAAATCGGTGATCGCCCAGGCCGTGATGGGACTACTGCCCGATGCACTCAAGCCTTCGGGCGGA CGCATCGAAGTGCTGGGCGAGAACGTCCTCGCAGCCGACGCCGCACGCCTGCGCGCATGGCGCGGTGCCCGCATGGCGAT GGTGTTCCAGGAACCCATGACGGCACTGAACCCTGTGATGCGCTGCGGCGCCCAGGTCGATGAGATGCTGGCCGAACACA CAGCACTCGGTGCCGCGGAGCGCCGGCAGAAGGTGCTGGCCATCTTCGCGCGCGTCAAGCTGCCGGAGCCCGAACGCATC TACGACGCCTATCCGCATCAGCTCTCGGGCGGACAGCGGCAGCGCATCGTGATTGCCATAGCGCTGATCCTGCGCCCTGC GCTGCTGATCTGCGACGAGCCCACCACCGCGCTGGACGTGACCACGCAGGCCGAGATCCTGTCGCTCATCCGCGAGATGC AGCAGGAGAACGGCACGGCGGTGCTGTTCATCACGCACGACTTCGGCGTGGTCGCGGACATCGCGGACCACGTCGTCGTG CTGCAACTGGGCCGCCAGGTCGAAAGCGGACCGAAAGACGAAGTGCTGCGCCGGCCGAAGGAGCCCTACACGCGCATGCT GCTCGACGCCGTGCCGCGCCTGGAACCCGCTTCACGCCCTCCCGTCGCCGACGCACCGCCGTTGCTCGACGCGCGCGGCG TGACCAAGACCTACCGCTCCGGCTCGTGGCCCGGCAAGCGCCGCACGGTGCACGCGGCGACCGATGTGTCGCTCCAGCTC CGTGCCGGCGAAACCGTGGGCATCGTGGGCGAGTCGGGCTCGGGCAAGTCCACCGTGGCGCGCTGCATCGCGCGGCTGAT CGAGCCGACCGGCGGCGAGGTCTGGGTGCCTCACCTCGAAGCGCAGCACGCGCCGCGCGCACGGCTCTCGGCGTTCCGGC GCATGGTGCAGGTCGTGTTCCAGGACCCGAACCGCTCGCTGAATCCGCGCCGCACGGTCGGCCAATCGATCATCGAAGGG CCGGTGAATTTCGGGCTTTCTCCCGAGAAGGCCTGGCAGCGCGCCGAGGAGCTGATGGACCTCGTGCGGCTCAAACCCGA GGTGCTGCACCGCTATCCGAGCGAGTTCTCCGGCGGCCAGCGGCAGCGCCTGTGCATCGCACGCGCGCTGGCCTGCGAGC CCCAGGTGCTGATCGCCGACGAAGCTGTTTCGGCGCTCGACGTTTCCGTGCAGGACCAGATCCTCAAGCTGCTCGCGGAG ATCCAGCAGCGCCTGTCCATCGGCATCCTCTTCATCACGCACGACCTGCGCGTGGCAAGCCAGATCTGCGACCGGCTGAT CGTCATGCACAAGGGCCGCATCGTCGAACAAGGCACCGCGCGCGACGTGCTGCTGTCGCCGCAAGAGGCCTACACCCGCT CCCTGTTGGCCGCGGCCCCTGGTCAGGGCTACGCGTTCGGCCAGGGTTGA Protein sequence : MARTSFSTTPPAAGSPCLVVRDLCIDLPQGADRPHAVSGVSFDVMPGQVVCLLGESGSGKSVIAQAVMGLLPDALKPSGG RIEVLGENVLAADAARLRAWRGARMAMVFQEPMTALNPVMRCGAQVDEMLAEHTALGAAERRQKVLAIFARVKLPEPERI YDAYPHQLSGGQRQRIVIAIALILRPALLICDEPTTALDVTTQAEILSLIREMQQENGTAVLFITHDFGVVADIADHVVV LQLGRQVESGPKDEVLRRPKEPYTRMLLDAVPRLEPASRPPVADAPPLLDARGVTKTYRSGSWPGKRRTVHAATDVSLQL RAGETVGIVGESGSGKSTVARCIARLIEPTGGEVWVPHLEAQHAPRARLSAFRRMVQVVFQDPNRSLNPRRTVGQSIIEG PVNFGLSPEKAWQRAEELMDLVRLKPEVLHRYPSEFSGGQRQRLCIARALACEPQVLIADEAVSALDVSVQDQILKLLAE IQQRLSIGILFITHDLRVASQICDRLIVMHKGRIVEQGTARDVLLSPQEAYTRSLLAAAPGQGYAFGQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-69 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-85 | 42 |
