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Name : Varpa_3411 (Varpa_3411) Accession : YP_004155707.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : glycine betaine/L-proline ABC transporter ATPase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4175 EC number : - Position : 3673370 - 3674623 bp Length : 1254 bp Strand : + Note : TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: vap:Vapar_2521 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase DNA sequence : ATGGCCAAAGGAATTCTCATCGACCATGTCTTCAAGGTGTTCGGCGACTCGCCCGACGAAGCCCTCGAACTCGTGCGCCA AGGTTTTTCGAAGAAGGAAATCCTCGCGCAGACGGGCCAGTCGATCGGCGTGTTCGATGCCACCTTCGAGATCCAGGCCG GCGAGATCTTCGTGATCATGGGCCTCTCGGGTTCGGGCAAGTCGACGCTCGTTCGGCTCCTGAACCGTCTGATCGAGCCG ACCGCGGGGCGCATCGTGATCGACGGCGCCGACATCAACGAGCACTCCGACACCAAGCTGCGCGCGCTGCGCCGCAAGGA CATCAGCATGGTGTTCCAGTCGTTCGCGCTGATGCCGCACATGACGGTGCGCGAGAACACCGCGTTCGGCCTGGAGCTCT CGGGCACCAGCAAGAAAGAGCGCCTGGCGCAAGCCGACAAGGCGCTCGCCCAGGTGGGCCTCGCGGGCTGGGGCGACAGC TACCCCGACGAGCTTTCCGGCGGCATGCAGCAGCGCGTGGGCCTGGCGCGCGCGCTGGCGTCCGACCCGTCGATCCTCTT GATGGACGAGGCCTTCTCGGCGCTCGATCCGATCATCCGCACCGAGATGCAGTCGGAGCTCCTGCGGCTGCAGCAGGAAC AGCGCCGCACCATCGTCTTCATCTCGCACGACCTCGATGAAGCCATGCGCATCGGCGACCGCATCGCGATCATGAAAGAC GGCCAGGTGATCCAGGTCGGCACGCCCGACGAGATCCTGCGCAACCCCGCCGACGACTACGTGCGCAGCTTCGTGCGAGG CGTGGACGCTGCGGCCGTCTTCAAGGCGGCGGACATCGCGCGCAAGTCGCTCACCGTGGTGTGCGAGCACCCCGAGCGCG GTGCGCGCGCGGCGCTCAAGCTGCTGGAAGACCAGGACCGCGACTTCGCCTACGTGACGAGCCCGAACAAGCGATTCCTG GGCGTCGTGTCGGCCGACACGCTGCGCGGCGCGCTCGACGGGCATTCGGATCCACTCGGGCTGCAGCACGCGTTCCTCGC CGACCTGCCGCGCATCGACGCCGAGGCTCCGGTGGCCGGCCTCATCGGCCAGCTCGCGCAGGCGCCGTGCGCGCTGCCGG TGGTGGCGGGCGACGGGCGCTTCTGCGGCGCGATCAGCAAGACGACGCTGCTCAAGTTCCTGGACCGCGACACGCCGCCG ATCGAGCCCGTCTCCCCGCATGCCGCCCCCGCCCTGGCCGCCGAGCCGCACTGA Protein sequence : MAKGILIDHVFKVFGDSPDEALELVRQGFSKKEILAQTGQSIGVFDATFEIQAGEIFVIMGLSGSGKSTLVRLLNRLIEP TAGRIVIDGADINEHSDTKLRALRRKDISMVFQSFALMPHMTVRENTAFGLELSGTSKKERLAQADKALAQVGLAGWGDS YPDELSGGMQQRVGLARALASDPSILLMDEAFSALDPIIRTEMQSELLRLQQEQRRTIVFISHDLDEAMRIGDRIAIMKD GQVIQVGTPDEILRNPADDYVRSFVRGVDAAAVFKAADIARKSLTVVCEHPERGARAALKLLEDQDRDFAYVTSPNKRFL GVVSADTLRGALDGHSDPLGLQHAFLADLPRIDAEAPVAGLIGQLAQAPCALPVVAGDGRFCGAISKTTLLKFLDRDTPP IEPVSPHAAPALAAEPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuAA | YP_281521.1 | glycine betaine transport ATP-binding protein | Not tested | Not named | Protein | 5e-83 | 51 |
