Gene Information

Name : Varpa_3177 (Varpa_3177)
Accession : YP_004155474.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : alcohol dehydrogenase zinc-binding domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 3414242 - 3415258 bp
Length : 1017 bp
Strand : -
Note : PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: vap:Vapar_2917 alcohol dehydrogenase zinc-binding domain protein

DNA sequence : 
ATGCCCACGAACAAGCAGATCCACCTCGACAACCGCCCCGAAGGCGAAGCCACCGCGAGCAACTTCAAGCTGGTGACCGT
CCAGACGCCCGCGCTCGCCGACAACCAGGTGCTGGTGCGCCACCACTACATGAGCCTCGACCCGTACATGCGCGGGCGCA
TGAACGACTCGAAGAGCTACACCGCCAACCAGCCCGTGGGCCAGGTCTTCCAGGGTGGCACCGTTGGCGAAGTGGTCGAG
AGCAAGCACCCGAAGTACGCGGTCGGCGACAAGGTGGTCGGCTTCGGCGGCTGGCAGGAGTACAGCGTGGTCGATGCCTC
GCAGCCCGGCGCGCTGAAGAAGGTCGACACCACGCACGTGCCGCTGTCGCACTACCTGGGTGCGGTCGGCATGCCGGGCG
TGACCGCGTGGTATGGCCTCGTGAAGATCATTGCGCCCAAGGCCGGCGAAACCGTGGTCATCACGGCGGCCAGCGGCGCG
GTGGGCAGCGCCTTCGGTGCGCTGGCCAAGGCGCGCGGCCTGCGCGTGGTCGGCATCGCGGGCGGCCCGGACAAGTGCAA
GTACGTGACCGACGAACTCGGCTTCGACGCCTGCATCGACTACCGCCAGCACCCCGACGTGAAGTCGATGAGCGCGGCGT
TGAAGGAAGCCTGTCCCGACGGCATCGACGGCTACTTCGAGAACGTCGGCGGCTACATCTTCGATGCGGTGCTGCTGCGC
TGCAACGCCTTTGCACGCGTGGCGCTGTGCGGGATGATCGCGGGCTACGACGGCGCGCCGCTGCCGCTGGCGAACCCGGC
GCTGATCCTCATCAACCGGCTGAAGATCGAGGGCTTCATCGTCAGCGAGCACATGGAAGTGTGGCCTGAGGCGCTGACCG
AGCTCGGCACGCTGGTGGGCACCGGCAAGCTGAGGCCGCGCGAGTCGGTCGCGCAGGGCATCGAATCCGCCCCCGAGGCC
TTCCTGGGTTTGCTGAAGGGCAAGAATTTCGGCAAGCAACTCGTCAAGCTGATCTGA

Protein sequence : 
MPTNKQIHLDNRPEGEATASNFKLVTVQTPALADNQVLVRHHYMSLDPYMRGRMNDSKSYTANQPVGQVFQGGTVGEVVE
SKHPKYAVGDKVVGFGGWQEYSVVDASQPGALKKVDTTHVPLSHYLGAVGMPGVTAWYGLVKIIAPKAGETVVITAASGA
VGSAFGALAKARGLRVVGIAGGPDKCKYVTDELGFDACIDYRQHPDVKSMSAALKEACPDGIDGYFENVGGYIFDAVLLR
CNAFARVALCGMIAGYDGAPLPLANPALILINRLKIEGFIVSEHMEVWPEALTELGTLVGTGKLRPRESVAQGIESAPEA
FLGLLKGKNFGKQLVKLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 1e-51 42