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Name : Varpa_3141 (Varpa_3141) Accession : YP_004155439.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 3377718 - 3379013 bp Length : 1296 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1; KEGG: rpe:RPE_2200 major facilitator transporter DNA sequence : GTGAACCCCGTCGAACAGAGAACCATCTCGAAGATCAGCTGGCGGCTCTTGCCGCTTCTGATGATCAGCTACTTCATCGC CTACCTCGATCGCGTGAACCTCGGCTTTGCCGGGTCCGCGATGTCGAAAGACCTGGGCTTCACCGCCGCCGTTTTCGGCA GCGCGGCCGGCATCTTCTTCCTCGCGTATTTCCTGTTCGAGGTGCCGAGCAACATGGCGCTGGAGCGCTTCGGCGCGCGC CGCTGGATCGCCCGCATCATGTTCAGCTGGGGCATTCTTTCCGCGGCGCAGGCCTGGGTGGGCGGCTCGACCAGCTTCAA CGTCGTGCGCTTCTTGCTCGGCATTGCCGAGGCCGGTTTCTTTCCGGGCGTCATCTTCTACATCACGCTCTGGTTTCCGG CGGCGTACCGCGCGCGCATCGTGGGCTGGTTCATGTTCGCGATTCCGATCTCCACGGTGATCGGCTCGCCCATCTCGGGC TACATCCTCAACATGGACGGCATCGGGGGCATGCACGGCTGGCAGTGGCTCTTCATCCTGGAGGCGATTCCCTCGCTGAT CCTGACCTTCTTCATCCTGTTCTACCTGCCCGATGGGCCGAAGGATGCGAAGTGGCTCTCGAATGAAGAGCGCGACTGGC TGCAGCACACGCTCGACGGCGAGCGCCGCAACCGCGAAGCGCTGCACACCATTTCATGGAAGCAGGCGCTGCTGAATCCG CGCGTGATCGGCCTGGGTTTCGTCTACATGGGCATCACCGTGCCGCTATATGGCTTGAGCTTTTTCCTGCCGCAGATCAT CAAGGGCTTCGGCGGGCTGGGCAACGTGGAGATTGGTTTCATCAACGCCTTCCCTTACCTGATCGGCGCCATCGCCATGG TGTTCTGGACCCGTGCGTCCGATGCGAAGAAGGAGCGCAAGTGGTTCCTGTTGATCCCGCTGGCCTGCATCTTCGTCGGC CTCGTCGCGGCCGCGGAAACCAGCGCGCCCATCCCCAAGATGGCGGCCGTGACGCTCGCCGCCTTCGGCATCTTCAGCGC GCTGCCGATGTTCTGGACGCTGCCCACCGCCATCCTGAGCGGCACCGCGGCCGCGGCCGGCATCGCGTGGATCAACTCCA TCGGCAACCTCGGCGGCTACATCGGCCCGACGATCTTCGGCGCGCTGAAGGACCGCATGGGGAACGATTTCTACGCCGTG CTTTTCCTGGCGCTGCTCGCGGCGCTGGGGTTCGTGCTGGTGCTGGTCATCGGGCACGACGCGCGGGCGGAGCAGGCGGC GTCTGGGCAGGCCTGA Protein sequence : MNPVEQRTISKISWRLLPLLMISYFIAYLDRVNLGFAGSAMSKDLGFTAAVFGSAAGIFFLAYFLFEVPSNMALERFGAR RWIARIMFSWGILSAAQAWVGGSTSFNVVRFLLGIAEAGFFPGVIFYITLWFPAAYRARIVGWFMFAIPISTVIGSPISG YILNMDGIGGMHGWQWLFILEAIPSLILTFFILFYLPDGPKDAKWLSNEERDWLQHTLDGERRNREALHTISWKQALLNP RVIGLGFVYMGITVPLYGLSFFLPQIIKGFGGLGNVEIGFINAFPYLIGAIAMVFWTRASDAKKERKWFLLIPLACIFVG LVAAAETSAPIPKMAAVTLAAFGIFSALPMFWTLPTAILSGTAAAAGIAWINSIGNLGGYIGPTIFGALKDRMGNDFYAV LFLALLAALGFVLVLVIGHDARAEQAASGQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-71 | 43 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-69 | 43 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-69 | 43 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 4e-69 | 43 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-69 | 43 |
