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Name : Varpa_2989 (Varpa_2989) Accession : YP_004155287.1 Strain : Variovorax paradoxus EPS Genome accession: NC_014931 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 3218551 - 3219912 bp Length : 1362 bp Strand : + Note : KEGG: vap:Vapar_2035 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding DNA sequence : ATGTACCGCGATCCAGTCCTGTCCTTTCAGCCCCTTCACGGTGTTCCCGTGGCCATGCGCCCGCTGCGCGTGGGCATGAT CGGCATCGGCACCGTGGGTTCGGGCACCTTCCGCGTGCTGGCCCGCAACCAGGCCGAGATTGCCGGCCGGGCAGGGCGCG GGATCGAGGTGGTGATGGTGGCCGCGCGCAATCTGCCGCGGGCGGCCAGCATCGTGGGCGACGGCGTCCCGCTGACCGAT GACCCGATGCACGTCGCCACGCACCCCGACATCGACGTGCTGGTCGAAGTGGCCGGCGGCACCGGCCCGGCGCGCGACTG GGTGCTGGCGGCCATCGCGCACGGCAAGCATGTGGTCACGGCCAACAAGGCGCTGCTGGCGGAGCACGGCGGCGAGATCT TCGCGGCCGCCCGGCAGCACGGCGTGGCGGTGGCCTACGAAGGCGCGGTGGCGGTCAGCATCCCCATCGTGAAGGCGCTG CGCGAAGGGCTCACCGCGAACCGCATCGAGTGGGTGGCGGGAATCATCAACGGCACCACCAATTTCATCCTGAGCAAGAT GCGCGACGAGGGTCTGGACTTCGCCGCAGCGCTCGCCGAGGCGCAAGCCCTGGGCTATGCCGAGGCCGACCCGGCCTTCG ACATCGAAGGCATCGACGCCGCGCACAAGCTCACGCTGCTCGCCGCCAATGCCTTCGGCTCGCCGGTGCGCTTTGCCGAT GTGCAGGTGGAGGGCATCACCGCGCTGCAGGGCGAGGATGTCGCCTCTGCCGAACAGTTGGGCTACCGCATCAAGCTGCT GGGCATCGCGCGCCGTCTGGACGAGGGCATCGAACTGCGCGTACAGCCCGCGCTCGTGCCCGCCGCGCATCTCATGGCGC ATGTGAACAGCTCGATGAACGCAGTCATGGTGAAGGGCGATGCGTCGGGCGTGACGATGTACTACGGCGCGGGTGCCGGC TCGGAGCAGACGGCATCGGCCGTGATCGCCGACCTGGTCGACGTGGCGCGCCTCGATGGCACCCATGCCGCGCAGCGCGT GCCGCACCTGGGCTTCCATGCGCACGCCATGAGCGAACTGCCGGTGTTGCCACGCGCGGCCGTGCGGACTTCCCATTACC TGCGCGTCCCCGTGCATTCGGCTAATCAGATCGAAGCGGTTGCGGTCTTGCTGGCTGGACAACAGTTGCCGGTGGAGCAG GTGGTGCTGGCGGCGGAGCGGCCGCAGGCCGGGCCTCAGGTGCTGGTGCTGACGGGGCTGGCGGCGCAAAGCGCGATCGA TCTTGCCGTGCATGCGCTGCAGGCGCACCCGGCAGTGAATGGCGCGGTGACGACGTTGCGGGTGGAAGCGCTCGCGGGCT GA Protein sequence : MYRDPVLSFQPLHGVPVAMRPLRVGMIGIGTVGSGTFRVLARNQAEIAGRAGRGIEVVMVAARNLPRAASIVGDGVPLTD DPMHVATHPDIDVLVEVAGGTGPARDWVLAAIAHGKHVVTANKALLAEHGGEIFAAARQHGVAVAYEGAVAVSIPIVKAL REGLTANRIEWVAGIINGTTNFILSKMRDEGLDFAAALAEAQALGYAEADPAFDIEGIDAAHKLTLLAANAFGSPVRFAD VQVEGITALQGEDVASAEQLGYRIKLLGIARRLDEGIELRVQPALVPAAHLMAHVNSSMNAVMVKGDASGVTMYYGAGAG SEQTASAVIADLVDVARLDGTHAAQRVPHLGFHAHAMSELPVLPRAAVRTSHYLRVPVHSANQIEAVAVLLAGQQLPVEQ VVLAAERPQAGPQVLVLTGLAAQSAIDLAVHALQAHPAVNGAVTTLRVEALAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 1e-79 | 47 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 1e-79 | 47 |
