Gene Information

Name : Varpa_2860 (Varpa_2860)
Accession : YP_004155163.1
Strain : Variovorax paradoxus EPS
Genome accession: NC_014931
Putative virulence/resistance : Unknown
Product : cyclase/dehydrase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 3068294 - 3068740 bp
Length : 447 bp
Strand : +
Note : PFAM: cyclase/dehydrase; KEGG: vap:Vapar_2758 cyclase/dehydrase

DNA sequence :
ATGAAAACAGTCAACAAGTCCGTCCTCATCTGGTACAGCGCCGAAGAGATGTACGCGCTCGTCACCGATGTGGCGAAGTA
TCCGCAGTTCCTCCCATGGTGCGACAAGGCCCGGATCCTCGAAGAGGACGAAGCCGGCATGACCGCCGAAGTCGGCTTGG
CCTTCGCCGGCCTGCGCCAGAGCTTTACCACCCGCAACACCCACATTCCCGGCCGGGAAGTGCAACTGAAACTGGTCGAA
GGCCCGTTCTCCAACCTCGACGGCAACTGGAAGTTCGTGCCCGTGGGCGAAGCGGGCGAACGCGCCTGCCGCGTCGAGCT
GCACATGAGCTACGGCTTCAGCAACTTCGCCCTGCAGGCGCTCGTTGGGCCGGTGTTCGACACCGTTGCATCGAGCCTGG
TCGAAGCCTTCGTCAAGCGCGCCGAGCAGGTCTACGGCGCCCCCTGA

Protein sequence :
MKTVNKSVLIWYSAEEMYALVTDVAKYPQFLPWCDKARILEEDEAGMTAEVGLAFAGLRQSFTTRNTHIPGREVQLKLVE
GPFSNLDGNWKFVPVGEAGERACRVELHMSYGFSNFALQALVGPVFDTVASSLVEAFVKRAEQVYGAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 1e-30 45